Nicrophorus vespilloides (burying beetle): 108563099
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Entry
108563099 CDS
T04922
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108563099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108563099
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108563099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108563099
NCBI-ProteinID:
XP_017777170
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MAKQYKSLHPIKYFRDYLAHDIRPDGRELTKYRPVIINANSVSTAEGSAIAKVGKTTVIC
GIKAELCQPKTETPTQGFLIPNLELPPLCSSKFKPGPPSDQAQVATKVIADIIENSGCIN
LQDLCISTEKLAWCLYADLVCLDHDGSIIDACLLALFTALKTVSLPKVEYNAELDSKNLQ
MDERTPFKLYNVPVSTTFAILDETVLMIDPTAEEENLCTGVVTIVIKDDELCSVLKPGGS
PITEEKLVDCIKQSMERAKLLGKLIDTATQETNDEIDK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaatacaaatctctccatccaatcaagtatttcagagattacttggcccac
gacatcagaccggatggcagggaactgaccaagtaccgaccagtcattatcaatgcgaac
tctgtttctacagccgaaggctcagctattgccaaagttggcaaaactacagtaatatgt
ggaatcaaagcggagctttgccagccgaaaacggaaactccaacgcagggcttcctcatt
ccgaatctggagttgccgcctttatgttcctcgaaattcaaacccggtccacccagtgat
caagcgcaggtggcgaccaaggtcatagcggacatcatcgagaattccggttgcatcaac
cttcaggatctctgcatttccacggagaaattggcttggtgtctgtacgcggatctggtg
tgtctagatcacgacggttccatcatcgacgcttgtctgctcgccctcttcacagccctt
aaaacagtgtctcttccgaaggtggaatacaacgcggaactggatagtaaaaacttgcag
atggacgaaaggacaccgttcaagctgtacaacgttcccgtctccacgactttcgctatc
ttggacgagacagtcctcatgatcgatcccaccgccgaggaggagaatctgtgcaccggt
gtcgtcaccatagtgataaaagacgacgagctgtgctcggtgctgaaaccgggcggcagt
cccatcaccgaggagaaactggtggactgcatcaagcagagcatggagagggcgaagctt
ctcggcaagctcatcgacaccgcaacgcaagagaccaacgatgagattgataaataa
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