Nicrophorus vespilloides (burying beetle): 108563170
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Entry
108563170 CDS
T04922
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108563170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvl03041
]
108563170
Spliceosome [BR:
nvl03041
]
Complex A
U1 snRNP components
U1 related factors
108563170
Complex B
108563170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
FF_RHG35_4th
Chon_Sulph_att
DTW
Baculo_RING
Motif
Other DBs
NCBI-GeneID:
108563170
NCBI-ProteinID:
XP_017777261
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MDPNIQPPPFVPPPAGIGTPPLMPPMSSFPPMIPQFNVPPPGFGAFQAPAPNPQEQWTEH
KAPDGRTYYYNSVTKQSSWQKPDTLKSPTELLLSQCPWKEYTADNGKIYYHNITTKESRW
VIPPELEEIKNKVSAEESKNKSNDAVASPLIAAAQASGVNSPSATSSPGGKSALEAAMAA
TLAAISIPTPPPKADEDSNLSTHSEPKESRNSTPEPRVFKDKKEAVEAFKEILKENNVPS
NATWDQCVKIIHNDPRYESFKRLNERKQVFNAYKTQKQKDEKEENRLRAKKSKETLEEFL
LKSERITSNTKYYKCDEIFTGLDVWNSVSDPDRRDIYEDVMFSLAKREKEDAKVLKKRNM
KKLAEVLNNMAEINYDTTWSEAQAMLLGNTTFKNDVNLLAMDKEDALIVFEDHIRELEKE
EVEVKEREKKRLKRQARKNRDQFLVLLDMLHEEGKLTSMSLWVELYPIISADIRFSAMLG
QNGSTPLDLFKFYVEDLKARFHDEKKIIKEILKDKEFEVKVNTTFEEFATVVCEDKKSAT
LDAGNVKLTYNSLLEKAEVKEKERVKEESKRMKKLEGNFKNRLREMNFNYDLPWDEAKSK
LENEEEFIAFSSDSERIKVYKSFQHEMEESCSHHHSRSKKSKKSKKNKKYKSSSNSDSEG
EVKKDKKRYRTPSPVAISEDESAGAVVGEEYKKKKSKKKHKRKSPSMSPTDDRTKKAQKN
RAAETEVSTKSGELSESELEKQRALLLEQLKEPESD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacatacaaccgccccctttcgttccgccgcctgcaggaattgggactccc
ccattaatgccaccaatgtcgagttttcctcctatgatcccacaattcaatgtcccacca
cccggctttggggcattccaagcacctgcacccaatccacaagagcagtggactgagcac
aaggcaccggatggcagaacatattattataattctgtgacaaagcaaagttcatggcaa
aagccggacaccttgaaatccccaacagagttacttctatctcaatgcccatggaaagag
tacactgcagataatggcaaaatttactatcacaatatcacaacaaaggaatcacgttgg
gttataccacctgaacttgaggaaatcaaaaacaaagtatctgcagaagaatctaagaat
aaatcgaatgatgctgttgcgagtccattgattgcggccgctcaagcatctggagtaaat
tcacctagcgcaacttctagcccgggtggaaaaagtgctttggaagccgcgatggctgca
actttggctgcaatatcaattcccacgcctccaccaaaagcagatgaagattcaaattta
tctacgcacagcgagccgaaggagtctcgaaattccacccccgagccgcgcgtattcaaa
gataagaaggaagcggtggaagcgttcaaagagatcctcaaggagaacaacgttccttcc
aacgctacatgggatcagtgcgtaaaaatcatacataacgatcctaggtatgaatccttc
aagcgtttgaacgaacggaaacaggtgtttaatgcttataaaacacagaagcagaaggac
gaaaaggaggaaaacagactgcgggcgaaaaagtcaaaagaaactctggaagaattcctg
ttgaaatccgagagaataacatcaaataccaagtattataaatgtgatgagatttttact
ggcctagatgtttggaatagtgtgagcgatccggataggagggatatttatgaggatgtt
atgttttcattggctaaacgcgaaaaggaagatgcgaaagtcttaaaaaagcggaacatg
aagaagttggcggaagtgctaaataatatggctgaaatcaattatgatacaacgtggagt
gaagctcaggcgatgcttttaggaaacacgacattcaagaacgacgttaatctattggca
atggataaagaggacgccttgatcgttttcgaggatcacattagggaactggaaaaggag
gaagtcgaagtgaaggagcgcgagaagaagcgactgaaaaggcaggcaaggaaaaatagg
gaccaatttctagttctgttggatatgctccacgaagaaggaaaattgacgtcaatgtct
ttatgggtagagctttatcccattatttcagctgacattagattttctgctatgctaggt
caaaacggctctacgccattggatttatttaaattctacgtagaagatctcaaagcgcgc
tttcacgatgaaaagaaaattatcaaggaaattctcaaagacaaagaattcgaggttaaa
gtgaacaccactttcgaggagttcgcaacggttgtttgcgaagataaaaagagcgctaca
ttagatgcgggtaacgtcaaattaacttacaactcgttattagagaaggcggaagtgaag
gaaaaggagcgcgtgaaggaagagtcgaagaggatgaagaaattagagggtaacttcaaa
aatcgtctaagagaaatgaatttcaattacgatttgccctgggacgaagccaagtccaaa
ttggaaaacgaagaagaatttattgcattttcttccgatagcgagagaataaaagtatac
aagagtttccaacacgaaatggaagagtcttgtagtcaccaccattcacggtcgaagaag
tctaaaaaaagtaagaaaaataaaaaatataagtcttcgagtaatagtgattccgagggt
gaggttaaaaaagataagaagaggtataggacgcctagccctgtggcaatttctgaagac
gaaagtgctggtgcggttgttggcgaagaatacaagaagaaaaaatccaagaagaagcac
aaaaggaaatccccttctatgagtccgaccgacgatcgaacgaaaaaagcgcaaaagaat
agggctgcggagactgaggtatcaacgaaaagcggggaactgagcgaatccgagctggag
aagcagagagcgctgcttttagaacaattgaaagaacctgaaagtgattaa
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