Nicrophorus vespilloides (burying beetle): 108563680
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Entry
108563680 CDS
T04922
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108563680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108563680
03036 Chromosome and associated proteins [BR:
nvl03036
]
108563680
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108563680
Coactivators
SAGA/TFTC/STAGA complex
108563680
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108563680
STAGA complex
108563680
TFTC complex
108563680
SAGA complex
108563680
SLIK complex
108563680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108563680
NCBI-ProteinID:
XP_017777911
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MEETRRDKVKKSKNDQISQIVATYLQKRNYPENIKPKEINENQMKLLMLVDSEVGRANSI
AYTCYNSDPVIIDHSFSKFISWLKEVHNKSKEYQDLDSIVTPLFCHLYIELYHKTHKDKD
VPINFFKLHLPTIEKFKCDYTLKSLINAVNSDSLDAVNLIKLFRSHRYYVNLSPRSSELL
KKYLSENSHVVLIQILQTWFEINIEETEEGEGVDMEHKEYMNGYAPHNSSKHELLKTLND
AILALDKRPKSIFKLQLSNSKNDINSGLMDRQHGFYVYNYDSKIVVSSIQPLKRLEFSDS
IGDIIFNEHGDIVYDFSYMRHSRMLLSASNDKTMKMFDLKTFRLVNTFKGHDYPVYKVAS
SPNGCYILTGSYDSSVRLWSPETAETLRLYAAHTQEITSLCFHPNSMYFASGSADRNIRM
WTINDPTPVRLFLDSRGTVYTSQFSPGGKYLATAGVDKVIRIWDLIAGKQYLEIKAGNEI
ITHLCWGGNDEMLSSYSMDQVVKTWQINTIDNDDDEHKPWIIYNLPGRLLSMSYTFQTFG
CLLASSPGPTYTENDHSMYM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaactcgcagagataaagtgaaaaaatcaaaaaacgatcaaatttctcagata
gtcgctacataccttcagaaacgaaactatccagagaatataaaacccaaagaaatcaat
gagaatcaaatgaaattgttaatgttagtggacagtgaagtaggcagagccaattcaatt
gcatacacttgttataatagtgatccagtaattatagaccacagtttttcaaagtttatt
tcatggttgaaagaagtacataacaaatccaaggaatatcaagatttggatagcatagta
acacctttattttgccatctgtacatagagttataccataaaacacataaggataaggat
gtgccaataaacttcttcaaacttcatcttccaacaattgagaaatttaagtgtgattat
acacttaaatcacttataaatgcagtaaattcagactcgttggatgctgtgaatttaata
aagctgttcagaagtcatcgttattatgtgaatctctctccaagatcatcagagttgcta
aaaaagtacctatcagagaattcgcatgttgtcttgattcaaatactccaaacatggttt
gaaattaacatagaagagactgaagaaggtgaaggtgttgacatggaacataaagaatat
atgaatggatatgctcctcacaattcatccaagcatgaattattgaagactctcaatgat
gctattcttgcacttgataagagaccaaaaagtatttttaaattacaattgagtaattcc
aagaatgacataaatagtggattaatggataggcagcatggattttatgtgtacaattat
gattcaaaaattgttgttagttccatacagcctttgaaaaggttagagtttagtgacagt
attggtgatattatatttaatgaacatggtgatattgtttatgacttctcatacatgaga
catagtaggatgttattatctgcatccaatgataagacaatgaagatgtttgatttgaag
acattcagattggttaatactttcaagggacatgattatcctgtctataaagttgcttca
agccccaatggctgttacattttaacaggatcttatgacagttcagtaagattatggtca
ccagaaactgcagaaactttaaggttgtatgcagcacacacacaagaaataacgtcccta
tgtttccatccaaattcaatgtactttgccagcggttcggcggacagaaatattagaatg
tggaccataaatgacccaactccagttagattgtttctggattcgaggggaaccgtttac
acatcgcagttcagtcctggaggaaaatatttggcaacggctggagtggataaagtcatt
aggatatgggatttgattgctggaaaacaataccttgaaattaaagctggcaacgagatt
atcactcacttgtgttggggtggcaatgatgaaatgctatctagctatagcatggaccaa
gttgtgaaaacatggcagatcaacacaatagataatgatgatgatgagcataaaccttgg
atcatttataatttacctggaagacttttatctatgtcatatacgtttcaaacatttggt
tgtttattagcaagtagtcctggtcctacgtataccgaaaacgatcattcaatgtatatg
taa
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