Nicrophorus vespilloides (burying beetle): 108564052
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Entry
108564052 CDS
T04922
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108564052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvl04121
]
108564052
Enzymes [BR:
nvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108564052
Ubiquitin system [BR:
nvl04121
]
Ubiquitin ligases (E3)
HECT type E3
108564052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
LAIKA
Motif
Other DBs
NCBI-GeneID:
108564052
NCBI-ProteinID:
XP_017778442
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MYAWGSTSNGELGVGGIEEENIYTPVELQWSEADKVTYAACGSGHTIFITNEGKLYSCGN
NDYGQLGHGQPRKRPRMSLFKEVSGLENYEIVSVACGSSHSMALNQWGEVFSWGSDSYGQ
LGHTLGQTPQMHPKIIKALATFNIVQIACGYRHSIALTNSGDILTWGANDYGQLGIGKES
IKECYPTIVSSLSGIPMSYIACGGNHSFAVTKSGAVFGWGKNSNGQLGLNDTESKSYPCH
LRTLRPIRVQYISCGENYSTFLTLDGGVFTCGAGMYGQLGHGTTSNEIVPRQVLELMGSK
ISQLQCGRQHTLALVPSRDRIYSFGLGGAGQLGAKKSINSSTPQIVAGPWIGTSRINRIF
AGGDHCFAKLLSEASTESPYDCRVLSANTQILNVSEDILNNCLSISKDGIVDQETLTYLE
TVFKSLSCINGSFLLPNTEHFFCSSKHHGIDLEKVARTFSTIGKLENDTVKEVIKNCIMD
DLLKKLTPSPPDVEALRVYITLPFYHEFNNPKEHLKLHKPFASSLLTLKVQATRVVESWW
SKLPTEYYEKLVSMFKDVVIFIIRNQRIPRTETATLDNTLISMLNILARLNKLNHTMDGQ
KVPYDTFHIVDLEDYLDVRVDYVSWLNDNTEKLYLCNYPFLFDSQAKTALLEADQTIQMC
SAMNQAAQHALFLTLLSSDVSRVHQYLMLNVSREHIVEDALRELANVSSNDLKKPLKVKF
YGEEAEDAGGVRKEFFMLLLRNILDPKYGMFKEYEETRSIWFSEDSFEDEMMYFLIGLIC
GLAIYNFTIIDIPFPLVLYKKLLKEHVNLSDVKSLSPTIANSLQSLLDYQEDDLEEVFSL
TFEISRDVYGVVRSIPLKPESDTPVTQRNKYEYVELYVDYLLNKSVKDHYTAFSKGFMKV
CGGRVLELFHSHELMAVVVGNENYDWHALEDAADYKNGYKSSDEVIRWFWEVLHDMSLED
KKKFLLFLTGSDRIPIQGMKAIKIIFQPTNDDKCLPVAHTCFNLLDLPRYRTKERLKYKL
LQAIQQTQGFSLV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctgggggtcaacatcaaatggggaactgggtgttggaggaattgaagaggag
aacatctacacacccgttgaactccaatggtcagaggctgataaagtgacctatgcagca
tgcggaagtggacacacaatattcatcacgaatgaagggaaattgtactcatgtggaaac
aatgattatgggcagttgggccatgggcagcctagaaaacggccacgtatgtccttgttt
aaggaagtctctggtttagagaattatgaaattgtgagtgttgcatgtggttcttcgcat
tcaatggctctgaaccagtggggtgaagtcttttcttggggttctgacagttatggacag
ctgggacacacgttaggacaaacacctcagatgcacccaaaaataattaaagcactcgca
acattcaatatagtccaaattgcttgtggttacagacattccatagctctgactaatagt
ggcgatatattgacatggggcgccaatgattatggtcagttgggtattggcaaggagagc
atcaaggaatgctatccaaccatagtttcctccttgtctggaattccaatgagctacata
gcatgcggcggaaatcattcttttgctgtaacaaaatccggtgcggtgttcggatgggga
aagaattccaatggacaattgggcttaaacgatacagaatctaaatcgtacccctgtcat
ttgaggaccttaagaccaattcgagttcaatatatatcgtgcggcgaaaattactcgaca
ttcctgactctcgatggtggtgttttcacgtgtggcgctggaatgtatggtcagttgggc
catggaactacctcgaacgaaatagttccaagacaagttcttgaattaatgggttcgaaa
atatcgcagttgcaatgcggaagacaacacacattggctttagttccatcgcgcgatcgc
atttacagttttggattgggcggcgcgggtcaattgggcgctaaaaaatcaataaactct
tcgactcctcaaatagttgcgggtccttggataggtacatctaggattaacaggatcttt
gctggaggcgatcattgcttcgcgaaactattgagcgaagcgtcaacagagtctccttat
gattgccgagtgttatctgcaaatacccaaatactgaatgttagtgaggacattttgaat
aattgtttgagcatcagcaaggacggaatcgtggaccaagaaactttgacgtacttggaa
acggttttcaaaagtctttcgtgcatcaatggttcattcctcttaccaaatacggaacat
ttcttttgctccagtaagcatcacggtattgacttggagaaagttgcaaggactttttca
actattggcaaattggaaaatgatactgttaaagaagtgattaagaattgtatcatggat
gatctcttgaagaagttgacaccttcaccaccagacgttgaagctttaagggtctacatc
acgttacctttctatcatgaattcaataacccaaaagaacatttaaaattacacaaacca
tttgctagttccttacttactttgaaggtgcaagccaccagagtcgtggaatcttggtgg
agcaaattaccaacggaatattacgagaaattggtctctatgtttaaagacgtagttatt
tttattataagaaatcaacgtattccacgcacagagactgcaacattagataacactctt
ataagtatgttgaatatcttggctcgtttgaacaagcttaatcacacgatggatggacag
aaagtgccttacgatacatttcatatagtcgatctggaagattatctggatgttcgtgta
gattacgtttcctggctaaacgacaacaccgaaaagttatatctatgtaattatcccttc
ttatttgattctcaagctaagacggctttattggaagcggaccaaactatccagatgtgc
agcgctatgaaccaggccgctcaacatgctctatttttaacactcttgagttctgatgtt
tctagagtacatcaatatttgatgctgaacgtgtcgcgcgaacatatcgtcgaagatgcc
ttgcgtgagttagctaacgtttccagcaatgatctcaaaaaacctttgaaggtcaaattt
tacggagaggaagcggaagacgcgggcggcgttagaaaggaattcttcatgctgcttctg
cgaaacattctggatccaaagtatggaatgttcaaagaatacgaagagacaaggagcata
tggttctcggaagattctttcgaggatgaaatgatgtacttcctgattggcttgatatgc
ggactcgccatttacaattttaccataattgatattccattcccattggtcctctacaag
aagctactgaaagagcatgttaatctttccgacgtcaaatctctttccccaacaatcgcc
aactcgctgcaatcactattggactaccaagaagatgatttggaagaagtgtttagtttg
acatttgaaatcagcagagacgtatacggggttgtgagatctataccgttgaaacctgaa
agcgatacacctgtgacccaaagaaataaatatgagtacgtcgaactatatgttgattat
ctgttaaacaaatcagttaaagatcattacaccgcgttttctaaaggattcatgaaagtc
tgcggtggaagggttttagaactgtttcattcgcacgaattgatggctgtagtcgtgggc
aacgaaaattacgattggcacgctttggaggatgctgctgattacaagaatggttataaa
tcgtccgacgaggtcatcagatggttctgggaagttttgcatgacatgtcactggaagac
aagaagaaatttttattgttcttaaccggaagtgatcgaattccaatccaaggaatgaaa
gcaataaagattatttttcaaccaactaatgatgataaatgtttaccagttgcccacacg
tgcttcaatctgctagatttgccaagatacaggacaaaagaacgcttgaagtataaatta
ttgcaagcaatacagcaaacccagggtttctccctggtttga
DBGET
integrated database retrieval system
