Nicrophorus vespilloides (burying beetle): 108564231
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Entry
108564231 CDS
T04922
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl04137
Mitophagy - animal
nvl04140
Autophagy - animal
nvl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108564231
04137 Mitophagy - animal
108564231
04148 Efferocytosis
108564231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvl03000
]
108564231
Transcription factors [BR:
nvl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108564231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HIF-1a_CTAD
HLH
BTB_3
PAS_2
HIF-1
Motif
Other DBs
NCBI-GeneID:
108564231
NCBI-ProteinID:
XP_017778692
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MNCNENVDFTYHQPAPSECWYGHNDDFHANEVYGDHRQQQQHQEFVYTAARPMGPVAASL
SLPCQSYTNWDYDKQCYNYYAEGCYTSCQFVTVVDMEDFMNNEKRKEKCRDAARCRRSRE
TEIFTDLSNALPLSEDKVSQLDKASVMRLAIAYLKVRDMIKLVPEPKMVKDETEASCSEE
SLVLKSLDGFAVALSDEGDFIYVSENVYSFLGISQVDLMGQNVYDYCHPCDHDEIKDILS
AKSQQVGETSKSFFLRLKCTLTSKGRSVNLKSATYKVIHFTGHMLQEVDDSKESAEGCSS
SNSSNNTTANDGSFKKCLVAIGQPIQHPSNIEAPLPSQTFLTKHNMNMTFTYADEKMLEF
LGYNPEDLIGKSIYSYSHALDSEVITSAYKCLFSKGQTETSRYRFLAKTGGYAWVLTQAT
LIYDKNQKPQSVVCVNYVISEIECKDEIYAEFQLASASIASTPEPPTDVKTETTISVPQN
INDIVDTAELVVPEVIEEEQQTLPSSNTEKPESTTERLFHNIGNYLEEIRGSSQSPRPLT
ATSKIFAPRTKEMSKGYITFSDEEPGITMLKDEPEDLTYLAPEAGEVVSLGDRLFSETFL
NLVNMKDSKDDNTEQIGSMPSEDTNLFDGFFDSYSAIIGDPFIYKNEGLSQLLSPDRIVK
SSDCSMQSLNSPTDSFSDEDQMSSFVTLMEEDMDMKAPYIPMTMGEDLPLVLTNDLMWSS
NVERPARNTDPPKTTSSLAQLLSSGVNNKRPIRSNDHGGTIIQNNTSATTGSSFNDYYDK
GQVNWDLSKVVASTGMQSHKRLNSTSFESTSNKRTKCEPKSGMTSELLQQLMSNNTHSGN
RSRVASKGKSNWLLDSGGPKAACVSQPSESVLMNLLEMSSSPQNLKADRLISDRELEDFL
RAQQLKLAARIGEPQRSDGGGKRILRRGISLLSTDGIPSLFDLTQQDYEVNAPVNNFLLQ
GDDLLQALDATGNI
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtaacgagaacgtggactttacgtaccaccagccagcgccatctgaatgctgg
tacggtcataatgatgatttccatgctaacgaagtttatggcgaccatcgtcagcagcag
caacatcaggaattcgtgtacacggcggcgagacccatgggtcccgtcgccgccagcctc
agcctcccatgccagtcttatacaaactgggattatgataaacagtgttacaactactac
gccgagggatgttacacttcttgtcaatttgtaactgttgtcgatatggaagacttcatg
aataatgagaagcgaaaggagaaatgtcgcgacgccgctcgttgccgccggtcacgagag
acagagatattcacggatctatcgaatgcgttgcccttgtccgaagataaggtctcgcag
ctggacaaagcttccgtgatgcggctcgctatagcctatctcaaagtcagggacatgatc
aaattagtaccggaacctaagatggtaaaggacgagactgaggcatcctgttccgaggaa
tcgctcgttctcaaatcgctggacggattcgcagtcgccctatccgacgaaggcgacttc
atctacgtatccgaaaacgtatactctttcctaggcatctcgcaagtcgatctgatggga
caaaatgtatacgactattgccacccgtgcgatcacgacgaaatcaaagacattttgtcg
gcgaaatcgcagcaggtcggcgaaacatcaaagtcgttcttcctacgtctcaagtgtacc
ctcaccagcaaaggaagatcagtcaacctcaaatccgccacatacaaagtaatacatttt
actgggcacatgcttcaagaagtggatgatagcaaggaatcggcagaaggatgtagtagt
agtaacagcagcaacaataccacagcgaatgatggcagcttcaagaaatgtcttgtggct
atcgggcagccgattcagcatccttcgaatatcgaagcaccgctccccagtcaaactttt
ctcaccaaacataatatgaacatgacattcacgtatgccgatgaaaaaatgttagaattc
ctgggatacaaccccgaggacctcatcgggaaatcgatttattcgtattctcatgcattg
gattctgaagtcatcacatcggcctacaaatgcttattttctaaaggacaaactgagacc
agcagatacagattccttgccaagaccggaggttatgcctgggttttaactcaggccacg
cttatctacgacaaaaaccagaaaccacagagtgtcgtctgcgtgaattatgttataagt
gagattgagtgcaaagatgaaatatatgcagagttccaattggctagcgccagcattgca
tctacccctgaaccaccaactgatgtaaagacggagactactatatccgtgccacagaac
atcaacgacatcgtcgatacagccgaattggtagttccagaagttatagaggaagagcaa
caaactttaccttcgtccaacactgaaaaaccggaatctaccaccgagaggcttttccat
aatataggaaactacctggaagagattagaggttcgtcacaatcgcccaggccactgacg
gccacttccaaaatattcgctcccagaacgaaggagatgagcaaaggatatatcacattt
tcggatgaggaaccgggcatcaccatgttgaaagacgagcctgaagatttaacatattta
gcgccagaggctggtgaggtggtgagtttaggtgatcgtctcttcagtgagactttcttg
aacctggtgaacatgaaagactcgaaggacgataacactgaacaaatcggctcaatgccg
tccgaagacacaaatctgtttgacggctttttcgattcgtactccgctatcataggggat
ccgttcatatacaagaacgaagggttatcgcaactcttgtcgccagatcgcatcgtcaag
agttcggattgcagtatgcagtccttaaacagcccaacggactcgttcagtgacgaagac
cagatgtcatcgttcgtgactttgatggaggaggacatggatatgaaggctccgtatata
cccatgactatgggcgaagacctgccgttagtcctgactaacgacctcatgtggagttcg
aatgttgaaaggcctgcaaggaacaccgatcctcctaagacgacgtccagtctagcgcag
ttgcttagttctggagtaaacaacaaacgtccgatcaggagtaacgaccatggtggaacc
attatacagaacaacacgtctgcgacgacaggaagtagttttaatgattactatgacaaa
ggtcaggtcaactgggatttgtcgaaggtagtagcatccacaggtatgcaatcccataag
cgcttgaactcgacaagctttgagtcaacctcgaacaagaggacgaagtgcgaaccgaaa
tcgggcatgacttcggagctgctgcagcagttgatgtctaataacacgcatagtgggaac
cgttccagggtagcatccaagggcaagagcaactggttgcttgattccggcggtcctaag
gctgcctgtgtctctcagcctagcgaaagtgttctcatgaacctcctggaaatgtcgtct
agtccgcaaaacttgaaggctgaccgattgataagcgacagggaattggaggattttctg
agggcgcaacagctaaagttggcagcgagaataggagagcctcaaagaagcgacgggggc
ggaaagaggattctgcgtcggggcatctcattgttgagcacggacgggattccgtccctc
tttgacctgacccaacaggattacgaggttaacgccccggtaaacaacttcctgctacaa
ggtgacgacctcctgcaggcattagatgcaaccggtaacatttag
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