Nicrophorus vespilloides (burying beetle): 108564309
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Entry
108564309 CDS
T04922
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvl03016
]
108564309
Enzymes [BR:
nvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
108564309
Transfer RNA biogenesis [BR:
nvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108564309
Prokaryotic type
108564309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
108564309
NCBI-ProteinID:
XP_017778798
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MNRGNNFRGNRRGGRGRGRGGFRGRGRGGNREKGGFQSNFHIQPEKLCETEACITEYISS
CEGFSGVLKSCYSDFHVNEINLNKEVGVITNQQIPEAFKLKKLEKPPTETPMAQISQEKW
DAILVMLESKDEVKVELDVTEFTKDQRSEVHQQLKDIFREKIVSSTVVDGESKTIQLQKF
SKNASMRNQSVQWPKECGEYVHFLLSKENLDTMDAVMKLGNVLHIKSSAFNYAGVKDRRA
KTTQWLSLRKVEPWKLLFKTKCYKNMHVGNITFKDKPLKLGQLWGNRFKIALRNVTADET
LINTALESLKEKGFINYYGLQRFGNDKEVPTFKIGIKLLQGNFKEAVNLILKPKKCENPT
LDITLAKIIYEESGNAKKACEKLNRHTSCIESTLLQALAKHASTDYVTALEAVPRNTRLL
YIHSYQSLVWNEVVSKRIKQFGLLPIVGDLVLIEEDNADQMETNSTVESNCNEQSKDKEE
LENKTDKSEKESMNTETATDLNAEEKINETETIVAENEETEEMTDNPPKVKILTEDDLKN
YTIFDIVLPLPGHNVIYPNNEIKKIYEDILARHGFRLEMPKQKVKSYSLSGNYRKLIELP
QDLEWKCIKYNQPRDLLIRSDFEEMIKIKEPEDPKDGKFNSLVVKFNLVSSSYATMALRE
ILKIDTSTQTHIKLNKYHETPNTEPAKEVTSNSLLTDKDKFEAFKMAVFGDNEVEDEENS
SKRKIDEVETVVFKKMKVEDEKKKDEGIKTQASLV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtggtaataactttagaggaaacagaagaggaggcagaggaagaggacgtggt
ggttttcgtggtagaggtcgtggaggtaatagagagaaaggtggattccaatctaacttc
cacatacagcctgagaaactttgcgaaacagaagcttgcattactgaatatattagcagt
tgtgaaggtttttcaggtgtacttaagtcatgttattctgatttccatgtgaatgaaatt
aacttgaacaaagaggttggtgtaattacaaaccaacagattccagaagctttcaagctg
aagaaactggagaaaccaccaacagaaactcctatggcacagataagtcaggagaaatgg
gatgctattttggttatgcttgagtccaaagacgaagtcaaagtggaacttgatgtgaca
gaatttactaaagatcaacgaagtgaagtgcatcaacagctgaaagatatattcagagag
aaaatagtaagctcaacagtagtagatggagaatccaaaactattcagttacagaaattt
tctaaaaatgcaagtatgaggaatcaaagtgttcagtggccaaaagagtgtggtgaatat
gttcactttttattaagtaaagagaatttggatacaatggatgctgtaatgaaattgggc
aatgtgttgcacataaagagttcagcatttaattatgcaggggtaaaagacaggagagca
aaaaccactcagtggcttagtttaaggaaagttgaaccatggaagcttttattcaagaca
aaatgttacaaaaatatgcatgtgggaaacataacattcaaagataaacccctaaagctt
ggtcagctttggggcaacagattcaaaatagctttaagaaatgttactgctgatgagaca
cttataaatacagctttagaatctctgaaagaaaaaggtttcattaactactatggtttg
caacgttttggaaatgataaggaagtgccaacttttaagattggcatcaaactcttgcag
ggaaactttaaggaagctgtcaacttaattttgaagcctaagaaatgtgagaatcccact
ttagatataacacttgccaaaattatttatgaggaatctggaaatgcgaaaaaagcttgt
gaaaaattgaacagacatacttcatgcattgaatccacattattacaagcactagccaaa
catgcatcaacagattatgtaactgctcttgaagctgttcctagaaatacaagactattg
tacattcattcctatcaaagtttggtttggaatgaagttgtctcgaaaaggatcaaacag
tttggtttactgccaatcgttggagatttagtgttaattgaagaagataatgctgatcaa
atggaaactaattctacagtggaatctaattgtaatgaacaaagtaaagataaggaagaa
cttgaaaacaaaacagataaatctgaaaaggaatctatgaacactgagactgccactgac
ttgaatgctgaagaaaagattaatgaaactgagaccattgttgctgaaaacgaagagact
gaagaaatgactgacaatccaccaaaggtgaaaattttaacagaggacgatttaaagaat
tatacaatttttgatattgtgctaccactgccagggcataatgttatttatcccaataat
gaaattaaaaagatatatgaagatattttagctaggcacggttttagacttgagatgccc
aaacagaaagtcaaatcatattcactaagtggcaactatagaaaactaatagagttacca
caagatttagaatggaagtgtataaagtataatcaaccaagagatcttttaataagatct
gattttgaagagatgattaaaattaaagaacccgaagatcctaaagatggaaaatttaat
agtcttgtagttaaatttaatctggtatcttcgtcttatgcaacaatggcattgagggaa
atcctaaaaattgatacatcgacacagactcacataaagttgaataaatatcacgagact
cctaatacagagcccgcgaaagaagtcaccagtaacagtttgttaactgacaaagacaaa
tttgaagcttttaagatggccgttttcggagataacgaggtcgaggatgaagagaattcc
agtaaaagaaagatcgacgaagttgagaccgttgttttcaagaagatgaaggtcgaggat
gaaaagaaaaaggatgaaggcatcaagactcaggcgtctttggtgtaa
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