Nicrophorus vespilloides (burying beetle): 108564757
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Entry
108564757 CDS
T04922
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108564757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108564757
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108564757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
LEM
Motif
Other DBs
NCBI-GeneID:
108564757
NCBI-ProteinID:
XP_017779359
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MSKSEATRALSFDFNQQLAFIRFYNNLPEKSASTVRFFNHGDYYSLHGNDAFLAMEKIYH
TNSVKYMGDEPKLAYACFSKNNFEKFIRDLLLVMQYRVEVYVKASQSRNNDWTLEYKGSP
GNLQQFEEILFDGCSELIGGYVMGVKLSKNNLLGVSCAHIVEGIFCVSEFTDNEFFTELE
AIVAQINPKECVIPLGESMELNNLKSMLERNNVLVVKTKKVDFNSENIFQDLNRLLYFAE
NQQRNAMCLAETKNTEAMGSLQAVIKYLNLTGDEQNFNQYNMRNMDAHRYVRLDCAAINA
LNLMHKSGSNMGKNDSVYGVLNCCSTPQGKRLLEKWIKQPLKDLNLLSERQDIVECLVND
SETREIICCGLNKIPDLLILAKRLCSKRANLQDCYKIYQSIDSVPSLISILRKINNKSVN
AMIVNPIGDILSDLQKFQSMVEQTIDLDLVDRGEFFIKPNFDEELNDLSKQKKKLEEKLQ
GLLRNVANDLCFDEGKTVKLDRTDQLGYFFRVTLKEEPILRKNKSIKIIDTVKGGVRFSN
NKLQDLNESYEEIKSAYEKQQKTVVSEILEVAAGYVDTLRNLNLSIAVVDVLVSFANAAV
NAPNAYVRPKLLPAGSGILKLKSGRHPCLEKFDGISCIPNDVEFIKDEKVLQIITGPNMG
GKSTFMRMVAVNVLMAQIGSFVACDEAEISLVDCILARVGADDCELKGMSTFMMEMVESR
GIIKSATSNSLVIVDELGRGTSTYDGCGIAWAVAEYLAKELKSFSLFATHYHEITQLEEE
IPTVINLHVSAIISDNTITPLYTMKEGPCDKSYGIHCAKVVQFPEDVIKFATKYQEKLED
VEGMKYIKDFDPSLKRKLIDEGNGMIAKVLKXFKGIDVANLSDDDLEAKLKKLKTDLAKQ
DNLYIKGLIGV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcggaggctacccgtgcccttagttttgattttaatcaacaacttgccttt
ataagattctacaacaatttgccggagaaatcagcctcgaccgtccgtttctttaaccat
ggagattactactcgttgcacggcaatgatgcgttccttgcaatggagaagatctaccac
accaattcggtcaagtacatgggggatgaaccgaagctggcctacgcatgtttcagcaaa
aacaatttcgagaaattcatcagagatctgctattggttatgcagtatcgcgttgaggtg
tacgtgaaggcgagccaatcgaggaacaatgattggacgttagagtacaagggttcgcct
ggtaaccttcagcaattcgaggagatccttttcgatggatgttccgaactgatcggaggt
tacgtgatgggcgttaagttgtctaaaaacaatttgcttggggtcagctgtgcacacata
gtcgagggaatcttttgcgtctcagaatttaccgacaacgaattcttcacggaattggaa
gccatcgttgcacaaataaatccaaaagaatgcgtgatcccattgggcgagtccatggag
ctgaacaacttgaagtccatgctggagcgcaataatgtgctcgtggtaaaaaccaagaaa
gtcgatttcaactctgagaacattttccaagatctgaataggttactgtacttcgccgaa
aatcagcagagaaacgctatgtgtctggctgaaacgaagaacaccgaagccatgggcagt
ttgcaagctgttatcaagtatctcaacttaacaggagatgaacaaaatttcaatcagtac
aatatgaggaatatggatgcacatagatacgttcgcttagattgcgccgcaataaacgct
ctcaacttgatgcataagtcgggttccaacatgggcaaaaatgacagtgtgtacggagtt
ttgaattgctgcagcacgccgcaagggaaacgtttgcttgagaaatggattaagcaacct
ttgaaggatttaaacctcttgagcgaacgacaggatatcgtggaatgtctggtgaatgat
tcagaaacccgcgaaataatctgttgtggcttgaacaagatcccagatctattaatatta
gcgaagcgcttgtgctcgaaaagagctaatctgcaagactgttacaagatctatcaaagc
atagacagtgttccatctttgatctcaattctaagaaaaattaataacaaatcggtaaat
gccatgattgtgaatccaattggagacattttatcggatttacagaagttccaatcgatg
gtggagcaaacgatcgatttggatttagtcgatcgcggagaatttttcatcaaacccaat
ttcgatgaagaactcaatgatttatccaagcaaaagaagaagctggaggagaaactgcaa
gggctgttgcgcaacgtcgccaatgacttgtgttttgatgaaggaaaaaccgtcaagtta
gatcgtaccgatcagttaggttacttcttcagggtgacactcaaggaggaacctatttta
cgcaaaaacaagtccatcaagatcattgataccgttaaaggtggagtgagattttccaac
aacaaattacaagatttgaacgaaagctacgaagaaatcaaatccgcttatgagaagcaa
caaaagacggtcgtttctgaaatattggaagtcgcagctggatatgtagatacgttaaga
aatcttaacttgagtattgctgttgtcgatgttttggtatcgttcgcaaatgctgctgta
aatgcaccaaacgcttacgttcgccctaagcttctaccagctggatcagggattttaaag
ttgaaaagtggtaggcatccttgcttggaaaaattcgatggcatcagctgtataccaaac
gatgttgaattcataaaagatgagaaggtgctgcaaataataacaggacccaacatgggc
ggtaaaagtactttcatgcggatggttgccgtgaacgttttgatggcgcaaatcggaagt
ttcgttgcatgcgatgaagcagaaatctccttggtggattgcattctggctagagttgga
gcggacgattgcgagttgaaggggatgtcaactttcatgatggaaatggtggagagtcgt
ggaataatcaaaagcgcaacttccaactcgttagtgatcgtggatgaattgggaagagga
acatccacctacgacggctgcggaatagcttgggctgttgctgagtatttggcgaaagaa
ctgaaatcgttttcgctcttcgccactcattatcacgagatcacacagttggaagaggaa
attcctacggtgataaatcttcacgtttcggctattatttcggataacaccatcacacct
ctatacacgatgaaggaaggaccgtgcgacaagagttacggcatacactgtgctaaagtt
gtacaattcccagaagatgttataaagtttgctactaaataccaagaaaaattggaagac
gttgaaggcatgaaatatatcaaagattttgatcccagtttgaaaagaaagttaattgac
gaagggaacggaatgatcgccaaggttctgaagnatttcaaaggaatagatgttgcgaac
ttaagtgacgatgatctagaagcgaaattaaaaaagttgaagacagatttggccaagcaa
gataatttatatatcaaaggcttaattggcgtttaa
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