Nicrophorus vespilloides (burying beetle): 108564973
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Entry
108564973 CDS
T04922
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvl03041
]
108564973
03016 Transfer RNA biogenesis [BR:
nvl03016
]
108564973
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108564973
Spliceosome [BR:
nvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108564973
Transfer RNA biogenesis [BR:
nvl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
108564973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Band_7_1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108564973
NCBI-ProteinID:
XP_017779679
UniProt:
A0ABM1MYM9
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MTAFEEFGVLPEIAKAIEELEWTLPTDIQAEGIPLVLGGGDVLMAAETGSGKTAAFCLPI
IQIVWETIKDIESGKAAKVSKNLSPAWQMSTLDRGNALAVSPCGLRVQSRDQKEWHGTRC
TRGVQSGKWGFEATVTDEGLCRVGWSTLSANLEIGTDRFGFGFGGTGKKSNNRQFDNYGE
AFGKDDVITCLLDLDKGEIKFLKNSVDLGTAFTINKQISNSAFFPSVVLKNAEMSFNFGN
SPLKYPLPNGYKPISTASKEIVMNTNGETGTTVSKPANNAPQAIIIEPSRELAEQTCKEI
VKFKKYLSNPSLRELLVVGGTNIKEQISSLQNNGVDIIVGTPGRLEDLIQGGYLSLANCR
FFVLDEADALLKQGFTDLICRLHMQMPKFTADGHRLQMVVCSATLHAFEVKKMAEKLMHF
PTWVDLKGEDSVPETVHHVVVNVNPQTDLSWHTMNSHIMTDGVHAKNEVRPGGNTPETMS
EAVKMLKGEYCVRAIDEHKMERAIIFCRTKLDCDNLEKYLKLLNKEKYSCVCLHGDRKPH
ERKSNLEMFKNNQVKFLICTDVAARGLDIKGLPFMINFTLPDEKSNYVHRIGRVGRAERM
GLAISLVSTVPEKVWYHGEWCKSRGRGCWNTNLVESRGCCMWYNEPMYLAEIEDHLNITI
QQVERDMKVPSNEFDGKVVYGQKKRQDGVQYENHASQMLSVVNSLSSLESKAQILYLKRF
ITGIQLSDRLRYMKI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagaattcggtgttcttccggaaatagcaaaagctatagaggagttg
gaatggaccttaccaacagatattcaagcagaaggaattcctctagttcttggtggagga
gatgttctgatggcagcagaaacaggaagtggaaaaactgctgctttttgtttaccaatt
attcagattgtgtgggaaactataaaggatattgagtctggcaaagctgcaaaagtttca
aaaaatttatcaccagcatggcaaatgtcaacattggacagaggaaatgccttagctgtg
tcaccttgtggtctaagagtgcagtctcgtgatcaaaaggaatggcatggtacaagatgc
acaaggggtgtgcaaagtggtaaatggggatttgaagctacagtcactgatgaaggtttg
tgcagagtgggctggtctactctttctgcaaatttagagattggaacagatagatttgga
tttggttttggtggaactggaaaaaagtccaacaataggcaatttgataattatggtgag
gcatttgggaaggatgatgttatcacatgtcttcttgatttggacaaaggagaaataaaa
ttcttgaagaatagtgttgatttaggaactgctttcactattaataaacaaatttctaat
agtgctttctttccatctgtagtattgaagaatgctgagatgtcatttaattttggtaat
tctccattaaaataccctttgccaaatggttataagccaatatctactgcatccaaagaa
atagttatgaacactaatggggagacaggaacaacggtatcaaaaccagcgaacaatgct
ccacaagctattataattgagccatcgcgagaactagcggaacaaacttgcaaagaaata
gttaagtttaagaagtatttaagtaatccttcgcttcgagaactgttggttgttggagga
accaatataaaggaacagatatcttctctccaaaataatggtgttgacattattgttgga
acgccgggaagattggaagatttgattcaaggaggatatttgtcgcttgcaaactgtcgt
ttcttcgtcctggatgaagctgatgctttattgaaacagggattcaccgatttgatttgc
agacttcacatgcaaatgccgaagtttacagctgatggacatcgtttacagatggtcgta
tgtagtgctactttgcacgccttcgaagttaaaaagatggcggaaaagctaatgcacttt
ccaacttgggttgatttgaaaggcgaagattcagtacccgaaacggttcaccacgtagtt
gtcaatgttaatccacagacagatcttagttggcatacaatgaactcccatataatgacc
gatggtgtgcatgcaaagaacgaagtacgaccaggtggaaacactccagaaactatgagc
gaagcggtaaaaatgttgaagggagagtactgtgtccgtgctattgacgagcacaagatg
gagagagcaattatcttctgtcgcactaagttggattgcgataatttggaaaagtatttg
aagcttttaaacaaagagaagtactcttgcgtctgcttgcatggggacaggaaacctcat
gagcgcaagtcgaacttggagatgtttaaaaataatcaagtgaaattccttatttgcacc
gatgttgccgctagagggttggacattaaaggattgccattcatgatcaactttacatta
ccggatgaaaaatcgaactacgtgcataggattgggcgtgttggaagagctgaacggatg
ggtttagctataagtttagtgagcacagttccagagaaagtttggtaccatggggagtgg
tgcaagagccgcggtagaggctgctggaacactaatttggtggagtccaggggctgttgc
atgtggtataacgaaccaatgtatctggcggaaatcgaggatcatctgaatataactata
caacaagtagagcgtgatatgaaagttccatcgaacgagttcgatggtaaagtggtttat
ggtcaaaagaaacgacaagatggtgtgcagtacgagaaccacgcatcccaaatgttgtca
gtcgtcaacagcttatccagtttggagagcaaggcccagattctctatttgaagcgattt
ataacaggaatacagctcagcgaccgactaagatatatgaaaatttaa
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