Nicrophorus vespilloides (burying beetle): 108565106
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Entry
108565106 CDS
T04922
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108565106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvl03009
]
108565106
Ribosome biogenesis [BR:
nvl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108565106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_EML
WD40
Beta-prop_WDR5
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_NWD2_C
RMC1_N
PALB2_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108565106
NCBI-ProteinID:
XP_017779887
UniProt:
A0ABM1MZ87
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSECKLHSVRFYKPKPMAIYCMAYNKCSKKLAVSRSDASIEIWNLKNTPFIEKTIASNSR
NYSIEGLAWSGDRLFSVGLHALLIEYDLKKLAVKNFTSVTGQTAFCLDVNKSQTNIAVGT
EQGYINIFTINDDGVAFEKFLDKQEGRILCLKYDATGNFLVTGGLDAIRIWNVKTGNAIH
RMTTGRTKRKQETIVWCLAVTSDFTIITGDSRGKISFWDGNLGVAISNYTSHQADVLSLC
LSEDEKTVYCSGIDSWIFSFVNVNVKDGMQKWVKCSKRVVHDHDVRALCMGDGNFLYSGG
VDGYVGRSCHPPMTVVKYPPIYQRPNVVVASKTKYILLKYPDYLEVWSLGNGDERYESNE
SKNTFKLSKENKRLLVLQRQVNNDLGKNRNEGIITAAISPNAKWIVFSTTSALRLFKFVC
DEEEENVELIPCDNLPQECGVSLNAVFTTDSNQLILSNEEGTVQVLNLKREPMLVQTIET
DSFFKDAITIMECCGKYLLAADTRSNIAVWVQTDKSWRLHCKLPKYKCAPTAIRIQPATS
NIVIAYSDQKILEYSLELKKTTKVIKDLEGKCDKTLNKHLSIRNIAFDPNNSNVIVLHDD
SCMYVINKDP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtgcaagctgcacagcgtcaggttttacaagcctaaacctatggcaatttac
tgcatggcatacaacaagtgttcgaagaaattggccgtctcaagatcggacgcttccata
gagatttggaatttaaagaataccccgttcattgaaaagactattgctagtaactccagg
aattacagtatcgagggattggcatggtctggtgatcgtttgttcagtgtgggtctgcat
gccttgctgattgagtatgacttgaagaagttagcagttaagaatttcacgagtgtcact
ggacagacggctttctgcttggatgtgaacaaaagtcaaacgaatatagctgttggcact
gagcaagggtacatcaatattttcactattaacgatgatggtgtggcgtttgaaaagttc
ttggataagcaggagggaaggatactttgtttgaagtacgatgcaactgggaatttcctt
gtgactggtggattggatgcgatcaggatttggaatgtgaagacaggaaacgctatacat
cggatgaccacgggtcgtacgaaaaggaagcaggagactatcgtttggtgtctggcggtg
acgtccgatttcactattataactggagattccagagggaagatttccttttgggacggt
aatttgggggtggccatttccaattacacatcgcatcaggcggacgtgctgagcctttgt
ttgagcgaggatgagaaaaccgtttattgctcggggattgattcgtggatattctctttc
gttaatgttaacgttaaggatggtatgcagaagtgggtgaagtgctcgaagagggtcgtg
catgatcacgatgtgagggctctttgtatgggtgacggtaacttcttgtattctggaggt
gttgatggatacgtgggtcgttcctgtcatccgcctatgacggttgtcaagtacccacct
atttatcagagacccaacgtcgtcgttgcatctaaaacgaagtacatattactcaagtac
cctgattatttggaggtttggagcttggggaatggagacgaaagatacgagagcaacgaa
agcaagaacacgtttaaattgagcaaggagaacaagaggttattagtgctgcaaaggcag
gtgaataatgatttgggcaagaacaggaacgagggtatcataacagctgcgatttcgccg
aacgccaaatggatagttttcagcacgacgtccgcactgagattattcaaattcgtatgc
gatgaagaggaggaaaatgtcgaattaatcccctgcgataatttaccgcaagagtgcggg
gtcagtttgaatgcagtctttacaacggacagcaatcagttgattctgtccaacgaggag
ggaactgtgcaggtgctgaatttgaagcgcgaaccgatgctggtccaaaccatcgaaacc
gattcattcttcaaagatgcgattacgataatggagtgctgcgggaaatatttgctggcc
gcggatacgcggagcaacatcgctgtttgggtgcagacggataaaagttggcgattacat
tgcaagttgcccaagtataaatgcgctccgaccgccatccgaatccaaccggctacatcc
aacatagtcatagcatattcggatcaaaagattttggaatacagtttggaattgaagaag
acgacgaaggttatcaaggatttggaaggaaagtgcgataaaactctgaacaagcatttg
agcatcaggaatatcgcgttcgatcccaacaacagcaacgtcatcgtgctgcacgatgat
agctgcatgtacgtgatcaacaaagatccg
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