Nicrophorus vespilloides (burying beetle): 108565214
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Entry
108565214 CDS
T04922
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03020
RNA polymerase
nvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108565214
09124 Replication and repair
03420 Nucleotide excision repair
108565214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108565214
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108565214
Enzymes [BR:
nvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108565214
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108565214
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108565214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
108565214
NCBI-ProteinID:
XP_017780043
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MYEQDEDNFEEEDGGEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIDLQAEAQHTTGEIENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIVTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAMKDGKYAYKAEIRSCLEHSSRPTSTLWVNMM
ARGGQAIKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKRHIDMLKDREYNNYGWQVLVASG
VVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILSYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIISPGIRVSGDDVVIGKTIILPVNDDELDGTTKKFTKRDASTFLRNS
ETGVVDQVMLTLNTEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAMANMRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVIS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagcaggacgaagataattttgaagaggaagatggaggagaaatcagctctgaa
ctgtggcaggaggcctgctggatcgtcattaacgcatactttgatgagaaaggtttggtc
cggcagcagctggacagtttcgatgagttcattcaaatgtctgttcagaggattgttgag
gattccccacagattgacttgcaagcagaagcacaacacacaactggagagattgaaaat
ccaccaagatatctattgaaatttgaacaaatctatttatcaaaaccaacacattgggaa
aaggatggtgcaccatcccctatgatgcctaatgaggcccgtttaaggaatcttacatat
tctgctccactgtatgttgatatcacaaaaaccattgttaaagatggtgaagatcctata
gtaactcaacatcaaaaaacatttattggaaaaattcctattatgttgagatcaacatat
tgcttgctcagcggtctaacggatcgtgatttgactgagttgaatgaatgcccgttggat
ccaggtggttattttattatcaacggctcagagaaagtacttattgctcaggagaagatg
gctacaaatactgtttacgtttttgcaatgaaagatggaaaatacgcttataaagctgaa
atccgttcgtgtttggaacacagttcaagaccgacttctacattgtgggttaatatgatg
gctaggggtggacaagctatcaagaaggcagctattggtcagagaatcatagcaatttta
ccatacattaaacaggaaatccccattatgattgtttttcgcgcattgggttttgtcgcc
gatcgcgatatcctcgaacatattatttatgatttcgacgatccagaaatgatggaaatg
gtcaaaccatctttggacgaggccttcgttattcaagaacagaacgtcgctttgaatttc
atcggagcaagaggtgctaggcctggagttacgaaggaaaaacgtattaaatatgctagg
gaaattctgcaaaaagaaatgttgccgcacgtcggtgtttccgatttctgtgaaacaaaa
aaagcttatttcttggggtacatggttcacagattgttattggcggcactcggcagaaga
gaattagatgacagggatcattacggtaataaacgtttggatttggctggaccattgctt
gctttccttttcagaggattattcaaaaatctgatgaaagaggtgaggatgtacgcacaa
aagtttattgaccgggggaaagatttcaatctcgatcttgctattaagacgaagcttatt
accgatggattgaggtattctttggctactggtaattggggtgaccaaaagaaagctcat
caggccagagctggtgtgtctcaggtattgaaccgtttgactttcgcttcaactttatcg
catttgcgtcgtgtgaattccccaatcggtcgtgatggtaaattggccaaaccgaggcag
ttgcataacacgctttggggtatgatctgtcctgccgaaaccccggagggtgccgccgta
ggtctcgtaaagaacttagctttgatggcttacatttccgttggttctcaaccttcccca
attttggagttcttagaagaatggtccatggagaacttggaagaaatcgctccttctgcc
atcgccgatgccaccaagatatttgttaacggatgttgggtgggtattcatagagatcct
gaacaattaatggcgactttgagaaaactcagacgtcagatggacattatcgtatctgaa
gtatcgatgatccgtgatatcagagatcgcgaaattaggatttacacagatgccggtcgt
atctgtagacctcttcttattgttgagaatggaacattgttattgaagaagagacatatt
gacatgttaaaggaccgcgaatacaacaattatggctggcaagttttggttgcttcaggt
gtcgtcgagtacatagacactctggaggaggaaactgtgatgattgccatgtctcccgat
gatttgcgtcaagagaaggaatacgcttattgtacaacatacacgcattgcgaaatccat
ccggcaatgattttgggcgtttgcgcttcgattattccattccctgatcataaccaaagt
cccaggaacacttatcaaagtgctatgggtaaacaagctatgggagtttatattacgaac
ttccacgtgcggatggacactttagcgcacgtactgtattatcctcacaaacctctggta
acaacaagatccatggagtatctacgtttcagagagttaccagctggtattaacagtatt
gtagctattttgtcttacacgggatataatcaggaagattccgttatcttgaacgcttct
gccgtagaacgaggatttttcagatctgtgttttaccgttcatacaaagatgctgaatca
aagcgtattggtgatcaggaagaacaattcgaaaaacccacgagacaaacttgtcagggt
atgcgtaacgcgttatacgacaaattggacgatgatggtattatatctcctggtattcgt
gtatctggagatgacgtggttattggaaaaacaataattttacctgtaaacgatgatgaa
ttggatggtaccaccaagaagttcaccaaaagggacgcttcgactttcttgcgtaacagt
gaaacgggagttgttgatcaggtcatgttaacattgaacaccgaaggttacaagttttgt
aaaatcagggtgaggtctgtgcgcatccctcaaattggtgacaaatttgcgtctcggcac
gggcaaaaaggtacctgcggtatccaatataggcaagaggatatgcctttcacatgcgag
ggattgactcccgatattattatcaaccctcacgctattccatcccgtatgacaattggg
catttaattgaatgcatccagggaaaagtttcctcgaataaaggagaaatcggcgacgcc
actccgttcaacgatgccgtcaacgtgcagaaaatctctaccctcttgcaagagtacggt
taccagttgagaggtaacgaagtcatgtacaatggacacactggaaggaaaatcaacgct
cagattttcttgggtccgacttactatcaacgtctcaagcatatggtggacgacaagatt
cactcaagggctcgaggacccgtccagatccttgtgagacagcctatggagggtagggcc
agggacggaggtctgcgtttcggcgagatggaacgggattgtcaaatttcccacggcgcc
gcgcagttcctcagggagagactgttcgaggtgtccgatccgtacaggatccacgtctgc
aatttctgtggactcattgctatggctaacatgaggaacaacacgtttgaatgcaaagga
tgtaaaaacaagacgcagatttcgcaggtccgtcttccttatgcagccaaacttctattc
caggaattgatgtccatgaatattgctcccagactgatggtcataagttaa
DBGET
integrated database retrieval system
