Nicrophorus vespilloides (burying beetle): 108566227
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Entry
108566227 CDS
T04922
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108566227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108566227
03041 Spliceosome [BR:
nvl03041
]
108566227
03036 Chromosome and associated proteins [BR:
nvl03036
]
108566227
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108566227
Spliceosome [BR:
nvl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108566227
Complex B
108566227
Complex C
U2 SnRNP specific factors
108566227
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108566227
TFTC complex
108566227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_LRRK2
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108566227
NCBI-ProteinID:
XP_017781511
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MFLYNLTLQRATGITHAIHGNFSGTKIQEIVISRGKSLELLRPDTNTGKVHTVLTVEIFG
VIRSLMAFRLTGGTKDYIIVGSDSGRIVILEYIPAKNIFDKLHQETFGKSGCRRIVPGQY
IALDPKGRGVMIGGIEKQKLVFILNRDSEARLTISSPLEAHKSNTLVYHMVGVDAEYDNP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGVNHVVRKYSEPLEEHANFLVTVPG
GKDGPSGVLICSENYLTYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDDDMVTEIKLKYFDTVPVATAMCVMKTGFLFVASEFGNHYLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRPLRNLVLVDELESLSPILSCKVADLAGEDT
PQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPANPNAVWTVKKKNDDKYDAYIIVSFLN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALSDDALIQVYPDGIRQICADKRVNEWKAPG
KKTIVKCAVNQRQVVIALSGGELVYFEMDRLHEYKERKRMNSDVVCMALANVPPGEQRSW
FLAVGLADSTVRIMSLDPNDCLSPRSMQALPVCAESLCIVEMGCTERNPEDAAAASTTSS
LYLNIGLQNGALLRTVLDPVSGDLTDTRTRYLGSRPVKLFRIQMHNSEAVLAMSSRSWLS
YYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFPLE
YTPRKFVIHPETSNLIILETEHNAYTEETKKQRRLQMAEEMREAAGEEEQELAKEMADAF
LNEDLPENIFSAPKAGHGMWASTLRIQDPVHGTTHKINRFVQNEAAMSLTLVKFHGQPEH
QWFLIVGVSRDLFLNPRQCSAGYLDTYKVDPSCREIELIHRTPVDEVPYALCAYNGRLLA
GVGRMLRMYDLGKKKLLRKCENKHIPNLIVNIQAMGKRIYVADVQESVYLIRYKRAENQL
IIFADDTHPRWITCTSILDYDTVATADKFGNIAIVRLPPNISDDVDEDPTGNKALWDRGL
LNGASQKADTVATFHVGETVTSLQKATLIPGGWESLIYTTLSGTVGVLVPFTAHEDHDFF
QHLEMYMRSENSPLCGRDHLSYRSYYYPVKNVIDGDLCEQYNSLDPAKQKSIANDLERTP
AEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtttctatataacctaacgctgcaaagggcgaccggcatcacccatgccatccacggc
aatttctcgggaacaaaaatccaagaaattgttatatccagaggcaagagcttggagttg
ctcaggcctgatacaaatacaggaaaagtacacactgtattgaccgttgaaatattcggc
gttataaggtcgcttatggcctttcgcttaacgggcggtacaaaagattatattatagtt
ggatctgattcaggaagaatcgtgatattagaatatatcccagcaaaaaatatcttcgac
aaattgcatcaagagacgttcggtaaatccggctgcaggagaatcgtgccgggacaatat
attgctctggacccgaaagggcgaggtgttatgattggcggcattgaaaaacagaaattg
gtgtttattttgaacagagactctgaagcacgattaaccatatcttccccactagaagcg
cataaaagcaatacattagtataccacatggttggagtggatgctgagtatgataaccca
atgtttgcttgcttggaaattgattatgaggaagccgattctgatcctaccggagaagca
gcacagaaaacccaacaaacgcttactttttacgagttagatttgggtgtaaatcacgtt
gtgagaaaatattcagaaccactagaagaacatgccaattttttggtaactgttcctgga
ggcaaagatggtccatctggagttttgatttgctctgagaattatttaacatataaaaat
ctgggtgatcagcctgatattcgttgtccaattcctagaaggagaaatgatcttgatgat
cctgagagaggaatgatctttgtttgctctgcaacacataaaactaaatccatgtttttc
ttccttgctcaaactgaacagggtgatatatttaagataacacttgaaactgatgatgac
atggtgacagaaatcaaattgaaatattttgatacagtccctgtggcaactgctatgtgt
gttatgaaaactggatttttgtttgttgcttcagaatttggaaaccattacttgtaccaa
attgcacatcttggagatgatgatgatgaattggagttcagttcagcaatgcctttggaa
gagggtgacactttcttctttgcgccaagaccacttcgaaacctggtattggtagatgag
ctggaatctttatctccaattttatcttgcaaagttgcggatttggctggagaagatact
ccccaattgtatatgctgtgtggaagaggtccaaggagttctttgagagtacttcgccat
ggcttggaagtatcagagatggcagtttctgaactaccagcaaatcccaatgctgtctgg
acagtcaaaaagaaaaacgatgataaatatgatgcttatattattgtttcctttcttaac
gctacactggtattatctattggcgagactgtggaagaagttacagacagtggattcctg
ggaacaacgccaacactatcgtgttcagcccttagcgatgatgctttaattcaggtttac
ccagacggtattcgacaaatctgtgcggataaacgtgttaatgaatggaaagctcctgga
aagaaaaccatcgtcaagtgtgctgtcaaccagagacaagttgttattgcacttagtggc
ggagaattggtgtatttcgagatggacagacttcacgaatataaagaacgcaaacgtatg
aactcagatgttgtgtgcatggcgcttgccaatgttccaccaggagagcagcgttcttgg
ttcttggctgtgggtttggccgacagcacagttcgtatcatgtctttggatcccaacgat
tgcctttctccacgttcaatgcaagcgttgccagtatgcgcggagagcttgtgcattgtt
gaaatgggatgtactgaacgcaatcccgaagacgctgctgcggcaagtaccacgagttcg
ttatacttgaatatagggttacagaacggtgcccttctcagaacagtattagatccagtt
tctggagatttgacagatacaagaactagatatttgggatcaagaccagtaaaattgttc
cgtatacaaatgcataattcagaggcagttttagctatgagcagtcgctcttggttaagt
tactattatcaaagtaggttctatctgaccccactgtcttatgagagcttagagtatgct
tccggattcagttctgaacaatgtccagaaggcattgtggccatctccacaaatactttg
cgtattttggctttggaaaagttgggagcagtcttcaatcaaatctctttcccattggaa
tacactccaagaaagtttgttatacatccagagacatcaaacttgatcatattggaaact
gaacacaatgcatacacggaagaaactaagaagcagcgtagactccaaatggccgaggaa
atgcgcgaggctgccggagaggaagaacaagaattggctaaggaaatggcagacgctttc
cttaatgaagatttaccagaaaacatattctctgccccaaaagcgggtcatggaatgtgg
gcttcaacattaagaattcaagatccagttcatggtacaactcacaaaatcaacagattt
gttcaaaatgaggcagccatgtctcttacacttgtcaaattccatggacaacctgaacat
caatggtttttgattgtcggtgtatcacgagacctcttcctcaatcctagacaatgcagt
gctggttatctcgatacctacaaggtcgatccgagctgtcgtgaaatagaattgatccac
aggactcctgttgacgaagtgccttacgctttgtgcgcctacaatggacgtttattggcc
ggagttggtcgtatgcttagaatgtacgacttgggaaagaagaagcttctgcgaaaatgt
gagaacaagcacattcctaatcttatcgtcaatattcaagcaatgggaaagcgaatttac
gtagccgatgtacaagagtctgtgtatctcataagatacaaacgcgcagaaaatcagttg
atcatcttcgccgacgatacccatccgaggtggatcacttgcacttctatcctcgattat
gatactgttgcaacagccgataaatttggaaacatcgctattgtaagattgcctcctaat
ataagcgatgacgtagacgaggatcctactgggaataaggcgctgtgggataggggttta
ttgaatggtgcatcgcagaaggccgataccgttgctacatttcatgttggtgaaactgtt
acttcacttcagaaggccactttgattcctggtggatgggaatctttaatttatactacc
ctttcgggcacagtaggtgtgttggttccattcaccgcgcacgaggatcacgatttcttc
cagcatctcgagatgtacatgcgcagtgaaaattctccgctttgcggaagagaccaccta
tcgtacagaagttactactatcccgtgaagaatgtgatcgatggtgatttgtgtgagcag
tacaactccctggatccggccaagcagaagagcattgcgaacgatctggaaagaacgcca
gcggaagtgtccaagaagttggaggatatcagaacgcgatacgccttctaa
DBGET
integrated database retrieval system
