Nicrophorus vespilloides (burying beetle): 108566239
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Entry
108566239 CDS
T04922
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108566239
04131 Membrane trafficking [BR:
nvl04131
]
108566239
03029 Mitochondrial biogenesis [BR:
nvl03029
]
108566239
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108566239
Membrane trafficking [BR:
nvl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108566239
Mitochondrial biogenesis [BR:
nvl03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108566239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
Vac14_Fab1_bd
HEAT_ECM29
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
108566239
NCBI-ProteinID:
XP_017781525
LinkDB
All DBs
Position
Unknown
AA seq
2810 aa
AA seq
DB search
MATQEKLLKSLEALRLLLNSNQALDPVKKKEKIQHCNIIVEAMMNPTIKIAKNFNTFLSF
AMDVLLQLCDDPESDVRMTADECLNKIIRAMGNSSITKIQIELHKEIKSNGSARSLRAAL
WRFALLAHHIRPHKGKPYVINLVPCIVKILERTEELVHETLANSMGNIMKTLGCFTMDRD
IKCILDACLKNVKNSQSAVIRRTSSSCILSVCLNCRKPYIYLSYVLNNLVDYLIPVQESH
ATFMIIGVFGCLKAILPKLKSFEKESRMNNYNFSSRKDAIDKSVTVDRFLQIYELSLHYS
SHGDHNIVNASLETLNTLFQNCTKQFKAALVNQDGLKCSKIVAESAKIKMRSPSQLSVAT
TLVSEDNLPLDVELFDNFKSEDIEKWIDESKLSVINVNYVKDDKAGNFCDSIDGTINSAN
DKSKCFDYSNITIGTLNDLYADSLKSESIVEHMDKLVLSEGSSEKSSSLKADDKSTSLLE
DVPLDIDVGDFLDKAVPLIYCGRLLTKQFLLNGVPGKLIPDKKVRVSTKNLALTCLSSIV
QIYPQIVVVHLDRKVTTQRISDVLIFANHGDPQLRGQVRILISNFIRAVLVLSNGDYQCW
IDDICSLDCFKLSNLMEMLLKGLKDESSTCSRQSLVCLNNFLRLLLDSELCVEAWPILNY
LPILAQDPYWLVKVKLVEVISELEYVTIAHAFPTSQYQNKVVFNILFELIKDEDQRVRLA
ASNAIVSVIPKLYFKHHYPNDSTVTFKAVSYRNTYIPRLFSGEIDGNINKKHFVESMPFP
YNTASKKLNIIEISLGKIITKLFQYLLTTTSKYYIYGCIETLNALSFKFPTSVYKKAWSC
FKTISVTKQRQIFQRSNSIGGIASPIEEYFISSSADLLNVTVHLLTNGIVCYDLNCHLNL
ITLAGNLFAGKWLENMKAPADLGLEGAREQWDLFADKTLAQMSEVFLVHVIKMLNIFSHI
IDESVPNLPQNKLPNLPSTSNLSPIKRKKSDLGEKKILSPSKTPDKEDKKVDSKVNAMGY
FANSPHYMKFYDILKVAYNNYKITLESEASENFLSLLKSTLNTFSQILEVATLTEIGRIA
EEILLYLKSIFHLDSASTVLCVQQLLKSLFGTNLSSDSDVILTYLNQNSQSGEKEGNFGF
YYRAAQIPFESIGNCVSALNTVGKVDCDGDSTVMGYLHRKENKIGANKGSDRILANYIRI
FEPMVIESLKHYTITSNVQLQCQVLQLLGQLVQLRVNYCLLDSEQIFIGFVLKQFEFIEE
GQISLSEELIPKIFQFLVHLSYGKQHSKSIIDIPKIIQLCDGLMASGQSPLTHCIPALKP
IVEDVFLLRNKSNTPNFKDLETAREFLVSMLLRLLEYGEIIDLFVLVLNESKYCDNSERW
IRLSRQVFDVFLSMLEQNKIKVDEGNCFEEIIKLIFALHPSAYKDVDKILINLFGEPPVQ
EDKHLVRYLGKVSILLLILSRMKEDKLLLRIADNQMEFAPESVYVHIVEPDPLNVTKICD
VLSHVQPEVVLLRFLFRIVHISLNKCVEIAQNQEHDFVVKQFSFFLMYCLYIFQSGNYTK
ITKVAIGIFNDKFDPLQGSSEKIPLEEINKGFLKLRFFYPLLTFQWCHILALVNYDDKKF
WSSTLRFAEIKDARLLKKPSSVNDDIVRIGSTIVYADFMSEHLQEDKLSWFFRNNIILLV
NLCSEPPIAELINSMHRNSTSSGLLIHSISTKCLDIEEPQFKMNLLQCVEGAHKAQTGNL
LMMLIPRLLECRQLAVSRNVSNLLCRRVELLLTMNKNEIVGQLSKTNLNGLMDVLVSLNL
TKKHEMLVGLLNKLATLYYDSPPLCLDERRAINLNCIKKLNIHKDWYISIIQGRCETANK
GVETAELLSKLSYEDVSNILRSKGFPKSVLKDCFNFGGEELLKVCSDYLFAEIKRIREAM
PTPHQVFLVEGRTSSANETKYKSNLCELLADETFLSSLKDIVLAVDVFVRCKDSGIPESS
HEDFAIFSVVCLELAAFSYENETGIDVGFLNACIRCCDGILKNNIMCAILGQDTHLSRLC
SAVNCLYKLIHELLVNSEPLPTVFSESLEETLDDPETRAAGECVHRMSVLVTWLQKVRNL
EVDIPRYLFISLRSIVISLGRLPLVNSFVLTPPTAWKCGLSVKMTGLYRTQVPPLPIDYL
QEIEILEEFIFRITLLGWSSRQQFEETWMCLLSVLSANPNSDSSIEEINAITHSTSLVVQ
AITSLLLQTLYYPRPGNSNVSKFIHVSRDRELLDHSTSVLKLKELQARFQAKMIEKMNGD
IYIPDVFSKPNLEKQTFGYSYGQVSVEYLQLSIKIIELKEDSEAAKVYLQREKVLSEIGL
DLNSCLQFLLDLYSQWIKSEEVLPLRLLQEVVKSILAISDLFSERSEFVWMLDIFSELSR
NHAVEDEIIHQYLVVGICKAVSVLSPDMEYFELAKKIITQSLKSAFISARISSIHGLLYI
LQMGTSPKTTTGAISEEMQIFLPIAIEYIQCHINTNNNILNQSQNHTLLVWSLAFYLIEN
IDFPLLDAEFVNNVLSNVLALLYDAKTVKNIYIPLLKGLERLIISKRLPKKNTGMIMQLA
LDKLKNANPVVALPAAQLLFTSMYIEYSDHLENSDVSNGLVQSNPDHLVQTIEKISVVFD
RIKKGFPFEVEILSESLSTLLNDFFSPADILTKVISEFLSPQQRHPMQMSKVVFKIFEYA
IEQSQLSLLQDWVVFSLTNFTQSFSIGMATWCLTCFFISASTNVWLRNIFPYVQKRIGRY
EYEDRKILCIAGSDFYNNLSNDGQRKTFVDSLMKVKDQVDMPFNELLGCL
NT seq
8433 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcaggagaaactactaaagtccttggaggctctgagactgctactgaactct
aaccaagctttagatccagtgaaaaagaaggagaagattcagcactgtaatatcattgtt
gaggctatgatgaatcccactataaagattgctaagaacttcaacactttcctgagtttt
gccatggatgttctcttacagttgtgtgatgatcctgagtctgatgtcaggatgacagct
gatgagtgcctgaataagatcatcagagcaatgggtaatagcagtattaccaagatccaa
atagaattgcacaaggaaattaaatctaatggatcagctaggtctttgagagctgctcta
tggagatttgcactgctggctcatcacataaggccacacaagggaaaaccatatgtcatt
aatttggtcccttgcatagtgaagattttggagagaactgaagaactagtccatgagact
ttagctaacagtatgggaaatataatgaagacacttggatgtttcactatggatagagat
atcaagtgtatactggatgcatgtttgaagaatgtgaaaaattctcagtctgcggtaatt
cgaaggacgtcctcaagttgtatattaagtgtgtgcctgaattgtagaaaaccatacatc
tacctttcctatgttctaaataatttagttgattatttaatacccgtccaggaaagccac
gccactttcatgataataggcgttttcggttgtctgaaagcaatattgccaaagctgaag
agtttcgagaaggagtcgagaatgaataattacaatttctcaagcagaaaagacgccatc
gataaatcagtgacagtcgatcgatttctacagatatacgaactgtctttgcattattcc
tcgcacggtgatcacaacattgtgaacgcttcgctagagacgttgaacacgctttttcaa
aattgtacaaagcaatttaaggcggctttagttaatcaagatggcctcaaatgtagcaaa
atcgttgcggaaagtgccaaaattaaaatgcgatcgcctagtcaattgagcgtagctacc
acgctagtttcggaagacaatttacctttggatgtggagctgtttgataacttcaaatcg
gaagatattgagaagtggatagacgaatccaaattgtccgtcatcaatgtgaattacgtt
aaagatgataaagcgggaaatttctgcgactcgatagatggtaccatcaacagtgccaac
gataagagcaagtgttttgattattccaatattaccatcggtactcttaatgatttgtac
gcggatagcttgaagagcgagagtattgttgagcacatggacaaactagtcttgagtgag
ggatcttctgaaaaaagtagctctttgaaggccgacgataaatcaacaagtttattagaa
gatgtacctttagatatcgacgttggggattttttggataaagcagtgcctttgatttat
tgtggtcgtttattaacgaagcaattcttgttgaacggtgtgcctggaaaattaattccc
gataagaaagtgcgagtttccacaaagaatcttgcattaacatgcctttcgagcatcgta
caaatatacccgcaaatagttgttgtccatttggatcggaaagtcacgacccagaggata
agcgatgtattgatttttgcaaatcacggagatcctcagctgaggggccaagtgcgtatc
ctcatttccaatttcatcagagccgttttagtattgagcaacggcgattatcaatgttgg
atcgacgatatttgcagtctggattgcttcaaattatcgaatttgatggaaatgctttta
aaaggattgaaagacgaatcatcaacttgcagtcggcaatctttagtttgtttgaacaat
tttctgcgattgctattggattcagagttatgtgttgaggcctggcccattttgaattac
cttccaattttagcgcaggatccatattggttggttaaggtgaaattagtagaggtcatt
tccgaattggagtacgtaaccatagcacacgcatttcccacttcgcagtatcaaaacaaa
gtggtttttaatattctatttgagctcatcaaggacgaagatcagcgtgttcgtttagca
gcatcaaatgctatagtctcggttataccaaaattgtatttcaaacatcattatcctaat
gactctacggttacgttcaaggctgtctcttaccgaaatacgtatatcccacgattattt
agtggagagatagatggtaacatcaacaagaaacacttcgtcgaaagtatgccatttcca
tataatacggcttccaaaaaattgaatatcatcgaaatatcgttaggaaaaatcatcacc
aaattgtttcaatacttattaacaacaacttcgaaatattatatttacggctgtatagag
actttgaatgctttgagcttcaaatttccaacgagtgtgtataaaaaggcttggagctgt
tttaagacgatttcggtaacgaagcagcggcagatattccagcgaagcaactccattgga
ggaatcgcatctccaatagaggaatacttcataagcagttccgcggatctactaaacgtt
acagttcatcttttgacgaacggaatcgtttgctatgatcttaattgccatttgaacttg
atcactttggctggaaatctctttgcaggtaaatggctggagaatatgaaagctccggcc
gatttgggtttggaaggagccagggaacaatgggatttatttgctgacaagactttggcg
caaatgtccgaagtattcttggtgcatgtgatcaaaatgctgaatatattttcccatata
atcgacgaatctgtgccaaatttacctcagaataagcttcccaatttaccatcgaccagc
aacttgtctcccatcaagagaaagaagagcgacttgggcgaaaagaagatactttcgccg
agcaaaacgcctgacaaggaagataaaaaggtcgattctaaagttaatgcaatgggatat
ttcgccaattctccgcattacatgaagttctacgatattttgaaagtcgcttacaataat
tacaagatcacattggagtctgaggcatcggaaaacttcctaagtttactgaagagtact
ctaaacactttctcgcaaatcctggaggtggcaaccttaacagaaataggaagaatcgct
gaagagattttgctgtatttaaaatccattttccacctggattcggcatcaactgtatta
tgcgtgcagcaattactgaaaagcctatttggcacaaatttgagctcggattccgatgta
attttgacgtacttgaatcaaaattctcaaagcggagagaaagaaggcaatttcggattt
tactatcgtgccgcacaaataccatttgaatcgattggaaattgcgtaagcgctttaaat
actgttggaaaagtggactgtgatggtgatagcacagtaatgggttacttgcatcgaaaa
gagaataagattggagcgaacaaaggttcggatagaatacttgccaattacataaggatt
ttcgaaccgatggttatcgaatctttaaagcattacacgattaccagtaatgttcaattg
caatgccaagttcttcagttgttggggcaattggtgcagttgagggtgaattattgtttg
cttgattccgagcagattttcataggtttcgttttgaagcaattcgaattcatcgaagag
ggtcaaattagtttatctgaagaattgataccgaaaattttccaatttttggttcattta
tcctacggcaaacaacattcgaagagtatcatagatattccgaagatcattcaactatgc
gatggtttaatggcgagcggacaatcacctttgactcattgcattcctgctctgaagccg
atcgttgaagatgtcttcctgttaaggaacaaatcgaatacaccgaattttaaagatttg
gaaaccgccagggaatttttggtttctatgcttttacgtttattggagtacggcgaaatc
atcgatctgttcgtgcttgtcttgaacgaaagcaagtattgcgataattcggaacgatgg
atcagattatcgcgtcaagtcttcgacgtctttctatcaatgcttgagcagaataaaatc
aaagtggatgaaggcaattgctttgaggaaatcatcaaactgatattcgcactgcatccg
agcgcctacaaagacgtcgataagatactcatcaacttatttggagaacctcctgtccaa
gaggataaacatttagtccgttatttaggaaaggtttctatattgttgttgatactctcc
cgaatgaaagaagacaaattgctcttgaggatcgccgataatcaaatggagtttgcaccg
gaaagcgtttatgtgcacatcgtagaacccgatcctctaaacgttaccaaaatctgcgac
gttctttctcacgtgcaaccggaagttgttttgttgcgtttcctgtttcgcatcgtgcac
atatctttgaataagtgcgttgaaatcgcgcaaaatcaagagcacgatttcgtcgtgaaa
caattcagtttctttttgatgtattgtttgtacatattccaatcagggaattatactaaa
attacgaaagtcgcgattggaattttcaacgataaatttgatcctttgcaggggtcttcc
gagaagattccgttggaggaaatcaataagggatttctgaaattaagatttttctatcca
ttgcttacttttcaatggtgccacatcttggcgttggtgaattacgacgacaaaaagttt
tggtcctccactttgagatttgctgaaattaaagatgcgcggcttctcaagaaaccatca
agtgttaatgatgatatcgttcgaatcggttccactatagtttatgcagattttatgagc
gaacatttacaggaggacaaattgtcttggttctttagaaacaatataatactgttggta
aatttgtgctcggagcctccgattgccgagctgatcaattctatgcatcgcaattccacc
tcgagtggcttgttgattcactcaatctccacaaaatgcctcgatattgaagaacctcag
ttcaagatgaaccttttgcaatgcgtggagggtgcacacaaagctcaaactggaaatcta
ctgatgatgttaataccaagattactggaatgcaggcagctggcagtttctagaaacgtt
agcaatttgttgtgcagaagggtcgaacttctgttaacaatgaataagaacgagattgta
ggacaattgtcgaaaactaatttaaatggattgatggatgttttggtttctttgaacttg
acaaaaaaacacgaaatgcttgtgggtcttttgaataagttagcaacactttactacgat
tcccctcctttatgtttagacgagaggcgagcaatcaatcttaattgcatcaagaaactc
aatattcacaaggactggtatatatcgataatccaaggtcgatgcgaaactgctaataaa
ggagtggaaactgcagaacttctaagtaaactttcttatgaagatgttagtaatatttta
cgttcgaagggatttccgaaatctgtgttaaaagattgtttcaactttggaggcgaggag
ttgctgaaggtctgcagcgattatctatttgcagaaataaagaggatcagggaagcaatg
ccgacgcctcatcaagttttcttagtggaaggacggacttctagtgccaatgaaactaag
tataaatctaatctgtgcgaattgctcgcggatgaaacatttttgtcttctttaaaggat
attgttttggcagttgatgtgttcgtgaggtgtaaagactcgggaataccagaatcgagt
cacgaagatttcgcgattttcagtgttgtatgtcttgagctagccgcgttttcttacgag
aatgaaacggggatcgacgtcgggtttttgaacgcttgcataagatgctgcgacggtatt
ctgaagaataatattatgtgcgcgattttaggccaagatacgcatctttcgcggctgtgt
tccgcggtgaactgtctatataagttaattcatgaacttctagttaattccgagcctctg
cctacggtcttctctgaaagcttggaggagacactcgacgatccggaaacccgtgcagca
ggtgaatgcgtgcaccggatgtccgttcttgtcacatggttgcaaaaggttcgcaacctg
gaagtagatatacctaggtatctcttcattagcttaagaagtattgtgatatctttgggc
agattgccattggtgaactcgtttgtacttactccgcccacggcgtggaagtgcgggctc
tccgtgaaaatgaccggtttgtaccgtactcaggtcccgccgcttcccatcgactacctc
caggaaatcgagattttagaagaatttatatttaggatcacgttgctaggttggtcttcg
cggcaacagttcgaagaaacatggatgtgtctcctcagcgtcctcagtgccaatcccaat
agcgacagttcaattgaagagatcaacgctattacacattccactagtttagtagttcaa
gctataacatctctcctcctgcaaactctatactatccccgtccaggcaacagtaacgtc
tccaaattcatacacgtctcccgcgatcgcgaattgctggatcattctacgagtgtattg
aaactgaaggagctgcaagcaagattccaagcgaaaatgattgagaaaatgaatggagac
atttacatacctgacgtgttctccaagccgaacctggagaagcagacatttggctactcg
tacgggcaagtttctgtggaatatttgcagttatccattaagatcatagagcttaaagag
gatagcgaagccgccaaagtttatctgcaacgagaaaaggtgctctcggaaatcggtttg
gatctgaattcgtgcttacaattcctccttgacctctactctcaatggatcaaatccgaa
gaggttctgcctttgaggctactccaagaagttgttaaatcaattctcgcgatatcggat
cttttcagtgaaagatcagagttcgtttggatgctggatatattctctgaattatcgaga
aaccacgccgtagaagatgaaatcattcatcaatatttggttgtaggaatctgcaaggct
gtatcggttttatcaccggacatggaatatttcgagttggccaaaaaaatcatcacgcag
tctttgaaaagtgcgtttatctcggctaggatttccagtatccacggtttactctacatc
ttgcaaatgggtacatctccaaaaacaaccaccggtgccatttccgaggaaatgcagatc
tttcttccaatagccatcgagtatatccagtgccatataaatacaaacaataatattttg
aatcaatcgcaaaaccacactctgctggtttggagtttagcgttttacttgatagagaat
attgactttccgcttttggatgcggaatttgtgaataacgttctgtccaacgtcttggct
ttgctgtacgatgcgaagaccgttaaaaatatatacattccattgttaaaaggtttggaa
aggttgataataagtaagaggcttccaaagaaaaacacgggaatgataatgcagttggct
cttgacaagttaaagaatgctaatcctgtggtggctcttccggctgctcaacttctgttt
acttccatgtatatagaatattctgatcatttggagaactctgatgtctccaatggattg
gttcagagtaaccctgatcatttagtacaaacaatcgaaaagatttccgtggtcttcgat
agaattaagaagggttttccgtttgaagttgaaatcttgagcgaatcgttgtcgacactc
ctgaacgatttcttctcgccggccgacatcttgactaaagtgatcagcgagtttctgtcg
ccccagcaaaggcatccgatgcaaatgagcaaagtcgttttcaagatcttcgagtacgct
attgaacagtcacagctgtcactcctccaagattgggttgtgtttagtttgacgaacttt
acgcagtcgttttcgatcggaatggcgacttggtgtttgacttgcttcttcatctctgca
agcacgaatgtctggcttcggaacatctttccgtacgtgcagaaacgcatcggcagatac
gagtacgaggataggaagatcctctgcattgcaggatcagatttctacaataacttaagt
aacgacggtcagagaaaaacgttcgtggatagtctgatgaaagtcaaagatcaggtcgac
atgcctttcaacgaactgttgggttgtttataa
DBGET
integrated database retrieval system
