Nicrophorus vespilloides (burying beetle): 108566369
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Entry
108566369 CDS
T04922
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022
Basal transcription factors
nvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108566369
09124 Replication and repair
03420 Nucleotide excision repair
108566369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108566369
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108566369
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108566369
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108566369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108566369
NCBI-ProteinID:
XP_017781706
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MAETAESSTNVTLIQPSNLECKNLYDYLKTRSSAVLEKLYNHPTICLAVYRELPELGRQY
VIRILFVEQPVPQAVVASWGSQAYSKEHVYVSKVLTELSVWLESPIPGGLTGWILSSTFK
RNLKIALLGGGKPWSMSSALEVDSKARDVSFLDSYSMERWECVLHYMVGSQQQEGISADA
VRILIHAGLMKCDDVDGSSVITRQGFQFLLLDRQAQVWHFILHYLDTVENKGLDLAECLT
FLFQLSFSTLGKDYSTEGMSNGLLVFLQHLREFGLVYQRKRKAGRFYPTRLALNITSSQS
QALLEEDTPKGYIVVETNYRVYAYTDSNLQVALLGLFTELLYRFPNVIVGILTRDSIRQA
LKGGITAEQIIGYLKQHVHPQMLRGEAKQPLPPTVVDQIKLWELERNRLTYSEGVLYGQF
LSQNDFNVLREFAHTNGHLIWCNRDKRTMVVSKAGHDDVKKFWKRYSKANSSPHNLTEA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctgagactgcagaatcttctacaaatgttaccctcatacaaccgtcaaacttagaa
tgtaagaatctgtatgattatttgaagacacgatcatcagcagtattagagaaactatac
aaccacccaactatatgtttggctgtgtacagggaattgccagaattggggagacaatat
gtaatccgaattttatttgttgagcaacctgtgccacaggcagttgtggcttcatggggt
tcacaggcttattctaaggagcatgtgtatgtcagtaaagtattaactgagctctctgtg
tggctggaatctccaattcctggaggtcttactggttggattctgagttccacattcaaa
aggaatctcaaaatagctttgctgggtggaggaaaaccatggagcatgtcatcagcgttg
gaggtggacagcaaagcgagagatgtatcatttctagattcatattcgatggagagatgg
gagtgcgttttgcattatatggttgggtcgcaacagcaggaaggcatttccgcggatgcc
gtgaggattttaatacatgcaggtttaatgaaatgtgatgatgttgatggtagttctgtg
ataacgcgtcagggatttcagtttctgttgctggatcggcaagctcaagtgtggcacttt
atcctgcattatttggatactgtggaaaataagggactcgatttggctgaatgtttgact
ttccttttccaattaagtttcagtactctgggaaaggattacagtactgagggtatgagt
aatggtttattagtgttcctgcaacatttacgtgaattcgggcttgtatatcaaagaaag
aggaaggcaggtcgtttctatcctactagattagctttgaatatcacgagcagccaaagc
caggcgctcttggaagaggacactccgaaagggtacatcgttgtggagacgaattatcga
gtatacgcttatacagattcaaatcttcaagttgcgttacttggactcttcaccgaacta
ctttatagatttccgaatgttatcgttggtattttaaccagagattctataagacaggct
ctcaagggcggtataacagctgaacaaattatcggttatcttaagcaacacgtgcatccg
caaatgttgagaggtgaagcaaaacagcctttaccgcccaccgtagtcgatcaaattaaa
ttgtgggaattggaacgaaacaggttgacctattcggaaggcgtcctgtacggacaattt
ttatcgcagaacgattttaacgtattgagggaattcgcccatacgaacggtcatttaatt
tggtgtaatcgcgacaagagaacgatggtcgtaagcaaggcaggacacgatgacgtgaag
aaattttggaaaagatactcgaaggcaaactcgtcaccacacaaccttaccgaagcatag
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