Nicrophorus vespilloides (burying beetle): 108566529
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Entry
108566529 CDS
T04922
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022
Basal transcription factors
nvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108566529
09124 Replication and repair
03420 Nucleotide excision repair
108566529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108566529
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108566529
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108566529
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108566529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
FYVE
Motif
Other DBs
NCBI-GeneID:
108566529
NCBI-ProteinID:
XP_017781948
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MDEEDPKEYRWETGYEKTWEVIQEDDDGFLEASVADIIQKSKRKRQALKQGHAKLGMMRH
LYIVIDCSDSMSGQDLKPTRLLCTVKLMEAFIEEFFDQNPISQLGIIIMHNKRAEKISEL
AGNGRKHAKAVKALNRTSLVGEPSLQNGLELALKSLKLLPSHASREILVVMGSLTTCDPT
DINVTIENLKTEGVRCCVIGLAAEVHVCRHLANETGGTYNVILEDSHYKDLLFQNVDPPP
AAVCLESSLIKMGFPHQMATEGTEDPLTMCMCHIDSADEGSKLTTGGYYCPQCNSKYCEL
PVECRSCGLTLVSAPHLARSYHHLFPAANYKELPYEHQSAICFACQKSFIADNDKQVYEC
NNCKKIFCTDCDMFIHDTLHTCPGCATNLATFQMSHSSQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacccgaaagagtatagatgggaaaccggatacgagaagacctgggag
gtcatacaggaggacgacgatggatttctggaagcctccgtagccgatatcatccagaaa
tcgaagaggaagaggcaagctctgaagcagggtcacgccaagctcggcatgatgagacat
ctgtacattgtgatcgactgttcggattcgatgtccgggcaagatttgaagcccactaga
ttgctgtgcactgtcaagctcatggaggcgttcatcgaggagttcttcgatcagaatccg
atcagccaattgggcataatcataatgcacaataagcgcgcggagaagataagcgagttg
gctggaaacggacggaagcacgcgaaggctgtcaaagcgttgaatcgtacgtcgcttgtc
ggtgaaccttcactgcagaacggtttggagttggcgttgaaatcgttgaagttgctgccg
agtcacgcgagcagagaaatactggtcgtcatgggcagtttgacgacgtgcgatcccact
gacattaacgtcaccattgagaatttgaaaactgaaggcgtcagatgctgcgtgatcggt
ttggcagctgaggtgcacgtgtgtcgacatctcgcgaacgagactggaggcacttacaac
gttatcctcgaggacagtcactacaaggatctgctcttccagaacgtcgatcctccacca
gctgccgtctgtttggagtcgagtctcataaagatgggattcccgcatcagatggcgacg
gaaggaacagaagatccgttaacgatgtgcatgtgtcacatagatagtgcagacgaagga
agcaaattgacgaccggcggatactactgtccgcaatgcaacagcaaatactgcgagctt
cccgtggagtgcagatcctgcgggctgactctggtgtccgctccgcatttagctagatcg
tatcatcatctgtttcctgctgcgaactacaaggaattaccgtacgagcatcaatctgca
atctgctttgcgtgtcagaagagtttcattgcagataatgataagcaggtgtacgaatgt
aataattgcaagaagatcttctgcacggactgcgacatgttcatacacgacactctgcac
acgtgtcccggttgtgcgacgaatctggccacctttcaaatgtcgcacagtagtcaataa
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