KEGG   Nicrophorus vespilloides (burying beetle): 108567445
Entry
108567445         CDS       T04922                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nvl  Nicrophorus vespilloides (burying beetle)
Pathway
nvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108567445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nvl03041]
    108567445
Spliceosome [BR:nvl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    108567445
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st PRP4 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_Vps41 eIF2A Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_HPS5 Ge1_WD40 MIOS_WD40 WD40_like Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 108567445
NCBI-ProteinID: XP_017783416
UniProt: A0ABM1N9B6
LinkDB
Position
Unknown
AA seq 511 aa
MSDEEEVSYVKKQKIIHYGSLQESEKARLATLESSSAESSQDVPSPAQTQQAPQVNTSNE
YMELEDAISKDKQALMEEFERRKKARSINVSTDDAEVKRNLRQLGEPICIFGEGPAERRS
RLRDILSCIGEDAIIRKEVEEEKKQMSYNQESTWYHEGPDSLKTARLWIAEYSLPRAKER
LEEARSLADLPSATRTAKTQEIQKRLQVLSIYSSQVGDTRPISFCQFSPNSELLATGSWT
GLCKIWSVPNCELKQTLKGHTHQIGAIIFHPQATLTQDKSICNMASCAADGSVKLWDFKS
DEPIADIEGHMPHRVSRIAFHPSGRFLGTCCYDSSWRLWDLQQCAEVLHQEGHGKPVHCI
SFQNDGSVCATGGLDSFGRVWDLRTGRCIMFMEGHLKSIYGIDFSPNGYHVATSSVDNTV
KIWDLRKRNILYTIPAHTNLISDVKYQKDCGDYLITGSYDNTIKIWTNRTWQPLKTLSGH
DGKVMSIDISPNNMYIASSSYDRTFKLWAPE
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgtctgatgaggaagaagtgagttacgtgaagaagcagaagatcatccactatggatcc
ctgcaggagtctgagaaggcccgtctggctactctggaatcaagcagcgcggaaagcagc
caagatgttccgagccccgcacaaacacagcaagccccacaagttaacacatcaaatgaa
tatatggaattggaagatgcaatatccaaagacaaacaagcacttatggaggagttcgag
aggcggaagaaggctaggtcgattaatgtctccactgatgacgccgaggtgaaacgtaac
ttgaggcaattaggagaacctatttgcatttttggagaaggtccagccgagaggagatct
cgtttaagggatatactgtcatgcatcggagaagatgcgattattaggaaagaagtggag
gaagagaagaaacagatgagctacaaccaagaatccacttggtatcacgaaggtcccgac
agtttaaagacggcgaggctatggattgcggagtattcattgcctagggcaaaggaaaga
ttggaagaagcgaggagtttagctgatttaccctcagctacgaggacagctaaaacacag
gagatacagaaacgattgcaggttctatcgatatacagcagtcaagtaggagacaccaga
ccaatttcattttgccaattcagtcctaattctgaacttttagcaactggttcttggacc
ggtttatgcaaaatttggagtgtacccaattgcgaattgaagcaaacactgaaaggacat
acccatcaaataggagcaatcattttccacccacaggcaacgctaacgcaagataaatct
atatgcaatatggcatcatgcgctgctgacggttctgttaaactgtgggatttcaaaagt
gatgaaccaattgccgatattgaaggccatatgcctcatcgagtatcaaggatagctttt
catccttctggtcgatttttgggaacttgctgttatgatagctcatggaggttgtgggat
ttgcaacagtgcgcagaagttttgcatcaggaagggcatggtaaacctgtgcattgtata
agtttccaaaacgatggttcagtttgtgctactggaggattagattcgtttggaagagta
tgggatttgaggactggacgttgtattatgtttatggaaggccatttgaaatctatatat
ggaattgatttctcgcccaacggttatcatgtggctacgtccagtgttgacaataccgta
aagatttgggatctgaggaaaaggaatattctttacacgataccagcgcacacaaatctt
atttcagatgtaaaatatcagaaagattgcggagattatttgataacaggttcttatgat
aacacaatcaaaatatggacaaaccggacgtggcaaccattgaaaacactttcgggacac
gatggaaaagtgatgagcattgacatatcaccgaataacatgtatatagcttctagttca
tatgacaggacgttcaaattatgggcacctgagtag

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