Nicrophorus vespilloides (burying beetle): 108567448
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Entry
108567448 CDS
T04922
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl04120
Ubiquitin mediated proteolysis
nvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108567448
04120 Ubiquitin mediated proteolysis
108567448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvl04121
]
108567448
Enzymes [BR:
nvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108567448
Ubiquitin system [BR:
nvl04121
]
Ubiquitin ligases (E3)
U-box type E3
108567448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
108567448
NCBI-ProteinID:
XP_017783423
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MSSELTQEEIRKRRLARLGGSAGFGGTSTSTSPPATPISQSPNNNIGVQQKEGNNGEAAL
EIECPMNVEMKEDITRKYENVFQVPSKPIDIGVACGSRTRTRPPPQRSDSETSSIHMEVD
EVSGEKVGGGNTDIDSGIENMEVEEGDSRRQRTSSSTEMTEEQLMNAIARVLLCSFKEAD
PLYLPQTAEALKDKSTTVYADIISQSVTEVIFRIMEGNAQNLQSDLEYETNASPGNTVSS
SSSSPIDTRGELVKSTVGDLETKSQAFNYLMECYVRVNVEERNHPKKSSIPPYSELLSDL
RSQIIHHSVLLMRECFSSSEEMKREMPLLVRPLVHQTLPRGYLTELVLRTHMDVPLFNVI
FMPILLGTHTLMKYSSIVANLHRYPIQVLSELTEIRCGARPLCMLITQLPIFHPELCTNS
VGREFVLKSFFGPFLSVSVFAEDEPKVAERFFSGYACDKTINLTLQQELENTRVNLYKIF
HEMLANVSSREPMLKYIATVLKHNEKRCQLHIEESILIGDGFMLNLLSVMQMLAVKVKLD
KIDFMYPFHENALINIKNETRVMFTSQEVTDWLQKRIDDGEKWNEVKFATKCWFLTLHCH
HVALMPTLQKYQRRLRLMRELQKLIDDTVASEAQWKNTPYANRNKLFIKKWKQQHKKLTK
SKICADTGVLDKNLMRRTLIFYTQVAEYLLYLLTNSKPGACVNTLPLPHNSDVPNVFSAI
PEWYVEDIAEFLLFALHFIPKVIIENMEDTMITFLLAMVCCSNSIKSPYLIAKIVEVIFT
INPQVQNNTESLHNRIMSHQISQTLLPSSLMKFYTDVETTGSSSEFYDKFTIRYNISLIF
KGMWVSPVHRQALINESRSGKQFVKFVNMLMNDTTFLLDESLESLKRIHEVQELIRDTQG
WAKMSSEQQQTRMRQMNADERQCKSYLTLARETVDMFHYLTTDIKEPFLRPELVDRLASM
LNFNLTQLCGPKCKNLKVKNPEKYGWEPRWLLSHIVDIYLHLDCEDFARAIAGDERSFSR
ELFDDAVTRMERSTIKSGVELEQFRTLSSKAQQILEDNQKSEDWMNDAPDEFKDPLMMTV
MTDPVLLPSGLIMDRSVIMRHLLNSSTDPFNRQHLTEDMLVPATELKERIRSWKAERSKS
T
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaactcacgcaggaagagattcgcaaaagaagattggcacgattgggtggg
agtgctggttttggtggaacctcaacatctacatcacctccagcaactccaatttctcaa
agccctaacaataacattggggtgcagcaaaaggagggcaacaatggtgaagcagcttta
gaaattgaatgtccgatgaatgtggagatgaaggaagacattacacgaaagtatgagaat
gtctttcaggtgccaagcaagccaattgatatcggagtggcttgtggcagtagaaccaga
actagaccaccgcctcagagaagtgactcagaaaccagttccatacatatggaagtagac
gaggtgagtggtgaaaaagttggtggtggtaatacagatattgattctggtattgaaaat
atggaggtggaggagggggattccaggagacaaagaacatcatcatcgacggagatgact
gaagagcagctgatgaacgccattgcaagagtattgctctgcagttttaaggaagcagat
ccactttatttgcctcaaactgctgaagcactgaaagataaatcaactactgtatatgca
gatattatttctcagagtgtaacagaagtaatatttagaataatggaaggaaatgctcag
aatttacaaagcgacttagaatatgaaacaaatgctagtccaggcaacactgtgagctca
agctcatcaagtcccatcgacactcgaggagaattggtcaagtcaactgtaggagatctg
gaaactaagagccaagcctttaactacctcatggaatgttatgttcgtgttaacgtggag
gaaagaaaccatcctaagaagtccagcattcctccgtacagcgaattattgagcgatctc
cgatcgcaaatcattcatcactctgttttgttaatgcgcgaatgtttttcttcgtccgaa
gagatgaagagggaaatgccgttactagttcgaccattggtccatcaaactctgccacgt
ggctatttaacggagctggttcttcgcacgcatatggatgtgccattgttcaatgttata
tttatgcctatattattaggaacgcatactttgatgaaatactctagtatcgtcgctaac
ttgcaccgctatccaatccaagttctttcagaattaacagaaattcggtgcggggctcgt
ccgctttgcatgttgatcacgcaattgccaatatttcacccggaactatgcaccaattcc
gttggtcgcgaattcgtcttgaaatcgttcttcggtccattcctctcggtgtctgtgttc
gccgaggacgagcccaaagttgccgaaaggttcttctcgggatacgcatgtgataaaacc
attaatctcacacttcaacaagaactggagaacactcgtgttaatctgtataaaattttc
cacgaaatgctagcgaatgtctccagcagagaaccaatgctcaaatatatcgcaactgta
ttaaaacataatgaaaaacgttgccaattgcacatcgaggagagcattttgattggagat
ggttttatgttaaatctcttgagcgttatgcaaatgttagcagtgaaagttaagttagac
aagatcgacttcatgtatccattccatgaaaatgcactaatcaacattaaaaacgaaacg
cgagtcatgttcacctcccaagaagttacagactggttgcaaaaaagaattgatgacggc
gagaaatggaacgaagtcaagtttgcaacgaaatgctggttcttgacattgcattgtcat
catgtagcgcttatgccgaccttacagaaatatcagagacgtttgcgtcttatgagagag
ttgcagaaattgattgatgatactgttgcttcagaagctcaatggaaaaatactccgtac
gcaaatagaaacaaactattcataaagaaatggaagcaacagcacaaaaaactaacaaag
tcgaaaatttgcgcggacaccggcgtcctggataaaaatctgatgagaagaacgctaatc
ttctacacacaagttgccgaatacttattatacctattgacaaattcaaaaccgggagct
tgcgtcaatactctgcctcttccgcacaactctgatgtgccaaacgtcttctccgcaatt
ccggagtggtacgttgaggacatcgccgaattccttttgtttgcgttacattttattccg
aaagtgatcatcgaaaatatggaagacaccatgataacatttttattggcaatggtttgc
tgttctaatagcattaaaagcccgtacttgattgccaaaatcgtagaagtgattttcacc
ataaatccgcaagtgcagaataacacggaatctttacacaaccgcataatgtcgcatcaa
atttcgcaaacactattgcctagttcgctgatgaagttctacacggacgttgaaacgact
ggatccagttcggagttttacgataaatttactattcgctacaacattagcttaatcttc
aaagggatgtgggtatctccggtgcacaggcaagcattgataaacgagtctcggagcggt
aagcagtttgtcaagttcgtaaacatgcttatgaacgacacgacctttttgttggacgag
tccttggagagtttaaagcggatccacgaagttcaagagttgatacgagacacacaaggc
tgggccaaaatgagctcggaacaacaacaaacgcgtatgcgccaaatgaatgccgatgag
cggcaatgcaagtcatatttaacattggcccgggaaacggtcgacatgttccactacttg
accacggacatcaaggaaccgttcctgcgtccggaactcgtcgaccgtctggcctccatg
ttgaatttcaatttgacgcaattatgcggccctaaatgcaagaatctcaaggtgaagaat
ccggaaaagtacggctgggaaccgagatggcttttgagtcacatcgtggacatttatttg
catttagattgcgaagattttgcaagggcaatcgctggcgacgaacgttctttcagcaga
gaactattcgatgatgccgtgaccaggatggagagatccaccataaagtcgggcgtagag
ttggagcaattcaggactctgtcatcgaaggcacaacagatactggaggataatcagaaa
tccgaagactggatgaacgacgctcccgacgagttcaaagatcctttgatgatgactgtg
atgaccgatcctgtactattgccgagtggtctcatcatggaccgttccgttataatgagg
catttactaaatagcagcactgatcccttcaataggcaacatttgactgaagacatgctt
gtaccagctactgagttgaaggagaggataagatcttggaaagcagagagatccaaatct
acttaa
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integrated database retrieval system
