Nicrophorus vespilloides (burying beetle): 108567736
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Entry
108567736 CDS
T04922
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108567736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108567736
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108567736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
108567736
NCBI-ProteinID:
XP_017783857
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MSKRLSSSQSNTLLNYFQSPKGKAKKPNVSSPVLIPKNQNEDSDEDVIKPKKRNRIAIVD
SDSDNENIDSPKRNPSKKTKVDENSSALKKFNYEKTNTPIKDKLQTSKLPITSTKPITND
ETRWLHENLEFLKPANRRDINKNKVGDPNYDQNTLYIPDSYLNTLTPAMRQWWVLKSKHM
DSVLFFKVGKFYELYHMDATVGVEHLGFSYMKGEFAHSGFPESAYGKMASSLIEQGFKVA
RVEQTETPAMMAERCKVGKATKFDKVVKREICQISLKGSCIYGAQLTEAQQVVPYYMTSI
CEKFIDNQKHFGVCFVDTSIGTFHLTNFQDDKHCSRLLALLAQHPPVLVLTERNQMSSDS
NEILKRSLGIIRRDNLTSGTQFLSAETAVKMLGSERYFRNSNDDLVWPSLFDELLTDRYP
KPEYELALKALGACIWYLKDCEMDIQVISMGQFELYTPVDTLQKSHEVKRDYMILDSITI
NNLKLFGGEGSLQKTLDYCSTPFGKRFFQQWICKPLCDVNKIESRQNTVKELYNDVELLR
NTKEILCKLPDLERQIAKIHMFGNKFCSTNHPDSRAVFYEAKIYANRKITDLLTTLQAFE
KLTEIPKIFSSCESQLLKRLTRHAPEGNFYDTVPTLNFFKDAFDHKKAKEEGKIIPQKGV
DQEYDEAEEKITGINQLLEEYLDEQRSFFKCEVNYFGADKKRFQLEIPESRCSKVTHEYQ
LEGTKKGSKPCKRYSTATSKDLLAKMMEAENDRNKILLDLNRRIFEKFSEKYEQWEKVIK
CVTVLDCLCSLAEYARNYSEDICLPKLLPFTDKPICIIENGRHPCIKNVDNFVPNDTEMG
SENHAPILILTGPNMGGKSTLMRQTVLIAIMAQIGSYVPAINCELSLVDRIFTRLGAYDD
ILKNQSTFMVELSEASSILQHATKHSFLLLDELGRGTSTHDGNAIASAYIRKLCDINCRT
MFSTHYHTLVDYFAGKNDIQLGYMVCMVENEGDVKKECVTFLYKMAAGVCPKSYGFNVAK
LAGVPSIIVKRATELAAALETADKNKNLLKKLLSSSLKDSRSLLMTLG
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgactcagtagctcgcaatctaacacattgctgaactattttcagtctcca
aaaggcaaagccaagaagcccaatgtatcgagcccagtactgatccccaaaaatcaaaat
gaagatagtgatgaggatgtcatcaaacccaagaaaaggaatcgcattgccattgttgac
agcgattcagacaatgaaaacattgatagtcctaaaagaaatccttcgaagaagactaaa
gttgatgagaattcgagtgctttgaaaaaatttaattatgaaaagacaaatactccaatt
aaggacaaactgcagacatcaaaattaccaattacaagcactaagcctataacaaatgat
gaaactagatggttgcatgagaatctggaattcttgaaacctgcaaatcgaagggatatt
aacaaaaataaagttggtgatcctaattatgatcagaatactttatatattcctgatagc
tacttaaacactttaactcctgcaatgaggcagtggtgggtgttgaagagtaagcatatg
gacagtgtgctttttttcaaagttgggaagttctatgaattatatcatatggatgccact
gtaggagttgaacaccttgggttttcttatatgaagggtgaatttgcacactctggattc
ccagaatctgcatatggtaagatggcttcatcattgattgagcagggatttaaggtagct
agagtagaacaaacagaaacaccagcaatgatggctgaaagatgtaaagttgggaaagct
actaaatttgataaagtggtgaagagggagatttgtcagatatctttaaaaggtagttgt
atttatggagcacaactgacagaggcgcaacaggtagttccatactacatgacatcgatc
tgtgagaagttcattgataatcagaaacattttggagtgtgctttgttgatacatctata
ggcaccttccacttgaccaattttcaagacgataagcattgttccagattgctagcgctg
ttagcccaacatccgccagttttagtattaacagaaaggaatcaaatgtcttcagattca
aatgaaattttgaagagatccttgggtattattcgacgtgataatttaactagcggtaca
cagtttctcagcgccgaaacggcggttaaaatgttaggtagtgaacgttatttccgaaac
tctaatgacgatcttgtatggccttctttatttgacgaattactgactgatagatatccg
aagccggaatatgaattagcactgaaagcgctgggagcttgtatttggtacttgaaggat
tgcgaaatggacattcaggtaatttcaatgggtcagtttgaactgtacacaccagtagat
actttgcagaagtctcatgaagttaaaagagattatatgatacttgattctattacaatt
aataatcttaagttgtttggtggagagggttctctgcaaaagactttagattactgttca
acaccatttggtaaaaggtttttccagcagtggatttgtaaaccattgtgtgatgttaat
aaaatcgaaagtaggcagaatactgtgaaagaactgtataatgacgttgagttattgagg
aatacaaaagagattttgtgcaaactaccagacttggaaaggcaaatagccaaaattcat
atgtttggaaataaattttgctcaacgaatcatccggacagccgagctgtattttacgag
gcgaagatttatgccaatcgaaaaattactgatcttttgactactcttcaagctttcgag
aagcttacagaaatcccaaaaatattcagctcatgcgaatctcagctattaaagagactg
actaggcatgctcctgaagggaatttctatgacacggtcccgactttgaatttcttcaaa
gatgcttttgaccataagaaagcaaaagaagaagggaagatcattccacagaaaggggtg
gaccaagaatacgatgaggcagaagaaaaaataactggcattaaccagctactagaagag
tacttggatgagcaacgttcgttcttcaaatgtgaagttaactattttggtgctgataag
aagcgtttccaattagaaataccggagagccggtgcagcaaagttacgcatgagtatcag
ttggagggtaccaagaaagggtcaaagccctgtaagagatattcaacggcgactagcaaa
gatctgttagcaaaaatgatggaggccgagaacgataggaacaaaattttgttggatttg
aaccgcaggattttcgagaagttttcagagaagtacgaacagtgggagaaggtcatcaag
tgcgtaactgtattggattgtctatgttcattggccgagtatgccaggaattactctgaa
gatatatgcttaccaaagctgttgccatttaccgataagccgatatgcatcattgaaaat
ggaagacatccatgtattaaaaatgtcgataactttgtaccgaatgatacggagatggga
agcgagaatcacgcgccaatattgattttaacaggacctaacatgggtggtaaatccacc
ctcatgagacaaaccgtgttaatcgctattatggcacaaatcggaagctacgtgcctgca
ataaactgcgagttaagtttggtagatcgcatctttacaagacttggagcttatgacgat
attctgaaaaaccaatcgacattcatggttgagttatctgaagcatcatccattcttcag
catgcaacgaaacactcgtttttattgctagacgagttaggaaggggaacttcaactcac
gatggtaacgctattgcaagcgcttatattagaaagctttgtgatataaattgtcgtacc
atgttttctacccattaccatacattggtcgactatttcgctggcaaaaacgatattcaa
ttgggatacatggtttgcatggttgaaaatgaaggggatgtgaaaaaggagtgcgtcaca
ttcttatacaagatggctgctggcgtttgtccaaaatcatatggtttcaatgtagccaaa
ttagctggagttccatcaattatagtgaagagagccaccgaattagcagctgctctcgaa
accgctgataagaataagaatctcctcaaaaaacttttgtcgtcttccttaaaagatagc
cgcagcttattgatgactttaggttaa
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integrated database retrieval system
