Nicrophorus vespilloides (burying beetle): 108568194
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Entry
108568194 CDS
T04922
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108568194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108568194
03036 Chromosome and associated proteins [BR:
nvl03036
]
108568194
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108568194
Coactivators
SAGA/TFTC/STAGA complex
108568194
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108568194
STAGA complex
108568194
TFTC complex
108568194
SAGA complex
108568194
SLIK complex
108568194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR54
Beta-prop_Vps41
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108568194
NCBI-ProteinID:
XP_017784625
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MHPPNPDKNQLLAVLQVLKKYNLKGTEELLKKEANIDESVESQDSDVSSVLTGYKSDGDP
EKYEDCYMELKRFIESSLDIYKHELGMILYPVLVHMYLELVYNGHTEKAINLMKRYGPEQ
DCYYQDDLKKLALVTKRDHMSGNELTDTFKSNQFIIRMSRDTLSLLKRHLHDKKASVLMN
IVQEHLYFDMYEGVARNKIQINATSGAVIGEATRQDNKTKVYYGLPKAPDIQSLAAPVED
EDDGLDADAPDKPKKKKPKKDPLFSKKTKSDPNAPPVDRIPIPDLKDNDKLEKVKALREA
SKRVNLNPETSPSICCYTLLNANHTVTCADITEDSSMLAVGFSDSLVKVWTLVPQKLRAL
KTANQLNDINIDAEDVLVRMMDERSGETSRSLFGHSGNVYSVSFAPDRTLLLSCSEDTTI
RLWSLQIWTCLVVYKGHMFPVWDVKFSPLGYYFASASNDRTARLWATDHYQPLRMFAGHF
SDVDCIQFHPNSNYVATGSSDRRVCLWDCTNGNHVRLMTGHKSPIHALAFSICGRFLSSA
GSDCKILVWDLAHGHLVAELNGHNKPIHTLTFSRCGNILVSGSLDCTVKMWDFSKLADDS
SSEDVNISHNPEVKMGDNYLLWNYGTKNSPLIHLHFTRRNLLLAIGMFDGISQTST
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaccaaatccagataaaaatcagcttctagctgttctgcaagtcctaaaaaaa
tataatttgaagggaactgaagaattattaaagaaggaggctaatatagatgaaagtgta
gaaagtcaagattctgacgttagcagtgttttaactggttataaaagtgatggtgatcct
gaaaagtatgaagattgttatatggaacttaaacgattcattgaatcctctcttgatatt
tataaacatgaattgggaatgattctgtatccagtattggttcatatgtatctagaatta
gtgtacaatggacatacagaaaaggccattaatttaatgaaacgttatggccctgagcaa
gattgttattatcaagatgatttgaaaaaacttgcacttgtcacaaaaagagatcatatg
agtggaaatgaacttacagatacatttaaatctaatcaattcattataagaatgtccaga
gacaccctttctctcttgaaaagacatttgcatgataaaaaagcatctgttctcatgaat
attgttcaagagcatttatattttgatatgtatgaaggagttgccaggaataaaattcaa
attaacgcaacatcaggagcagttattggtgaagctacacgtcaagataataagacaaaa
gtatattatggattaccaaaggcaccagatatacaatctttggcagcaccagtagaagat
gaagatgatggacttgatgcagatgctccagataaacctaagaaaaagaagcccaaaaaa
gatcctctattttcaaaaaaaactaaatctgatcctaatgcaccacctgttgacagaatt
ccgattccagatctgaaggacaatgataaattagaaaaggtaaaagcattgagagaagct
tctaaaagagtaaatttaaatccagaaacatcgccttccatttgttgctatactttgttg
aatgcaaaccacaccgttacatgtgctgacatcacagaagattcaagtatgttagctgtc
ggttttagtgactcattggttaaagtctggacgcttgtacctcaaaaattgagggctcta
aaaactgcaaatcaattaaatgatattaatattgacgcagaagatgtattggttcgaatg
atggacgaaagatctggtgaaacatcgagatctttatttgggcattctggaaacgtgtat
tcagtttcatttgcgccggacaggactttgctgctgagttgttctgaagatacgactatt
cgcttatggagtttacaaatttggacttgtctcgttgtatataagggacatatgtttccg
gtttgggatgtaaaattctcaccgctcggttattattttgcttctgcttcgaatgataga
actgcgagattatgggccacggatcactatcaacctctccggatgtttgctggccacttt
tcggatgtagattgtattcaatttcatcccaactcaaactacgtcgctacaggttcaagc
gaccgaagagtttgcttatgggattgcacaaatggtaatcacgttagattaatgacaggc
cataaatcgcctatccatgcattggcgttcagcatttgcggccgattcctttcttcggct
ggatcagactgcaaaatattagtttgggatttagcccatggccatttagtggcagaattg
aatggacacaacaagccaatacatacattaacatttagtagatgtggcaacatcttagtt
tcaggttcattggattgtacagtcaaaatgtgggatttttctaaattagcagacgatagt
agttcagaagacgttaatatttcacataacccggaggttaaaatgggagataactatcta
ctatggaattacggtactaaaaactcgccacttattcatttacattttactagaagaaac
ttattgttagcaattggcatgtttgacggaatatcccaaacaagtacttag
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integrated database retrieval system
