Nicrophorus vespilloides (burying beetle): 108568280
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Entry
108568280 CDS
T04922
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03013
Nucleocytoplasmic transport
nvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108568280
03015 mRNA surveillance pathway
108568280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108568280
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108568280
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108568280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
108568280
NCBI-ProteinID:
XP_017784748
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSQKVDWSQYVDQQEKLVTNQISQIQVSSATETTEEGKKDELSPAETSLLQKIIRKGLVE
NKNDLEIQRKDPTSPLHSVKTFEALNLRPNLLKGVYDMGFNAPSKIQETALPTLLAEPPQ
NLIAQSQSGTGKTAAFVLAMLSRVDASKKHPQVLCLSPTYELAIQTGEVAAKMARFCPEI
ELRFAVRGENLTEGTKLSEHVIIGTPGKVLDWGIKFRMFDLSKINVFVLDEADVMIDTQG
HQDQCLKIHKSLRPNCQMMLFSATYEQKVMDFAEIIIKNPLIIRLKREEESLDNIKQYYV
KCSNEKQKYNAVTNIYGTLTVGQAIIFCQTRKSAAWLAEKMSKDGHAVALLSGELSVEQR
IAVLDRYRSGKEKVLITTNVLSRGIDVEQVTIVVNFDLPVNVHGDADCETYLHRIGRTGR
FGKHGIAINLVDSNQSQRVCEDIERHFNKKIMLLNAEDSEEIEKIGV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaaagtagattggtcgcaatatgttgatcagcaggaaaaattggtcaccaat
caaatttcgcaaatccaagtgagttccgcgacggaaacgacagaggaaggtaaaaaagat
gaactatctcctgctgaaacaagtttacttcaaaaaatcattcgtaagggtttggtagaa
aacaaaaatgatcttgagattcagcgcaaggatcccacatccccactgcattctgtaaag
acatttgaggctttaaatcttcgacccaatttattgaaaggtgtttatgatatgggcttc
aatgcaccatcaaaaattcaagaaactgctctgccaacattattagcagaaccaccacag
aacttaattgcacaatctcaatcaggtacaggaaaaactgctgcctttgtgcttgccatg
ttgagtagagttgatgcatccaagaaacatcctcaagtgttatgtctatctccaacatat
gaattggctatacaaactggagaagttgcagcaaaaatggccagattttgtccagaaatt
gaactgcgctttgccgtaaggggcgagaacttgaccgaaggcactaaactatcagagcat
gttattattgggaccccaggaaaagttctggattggggcatcaaattcagaatgttcgat
ttatccaaaattaacgttttcgtcttggacgaggccgacgtaatgatagacactcaaggt
caccaggatcaatgtcttaaaatccataagagtttgaggccaaattgtcaaatgatgttg
ttttcagcaacctatgagcagaaagtaatggatttcgctgaaattataattaaaaatcca
cttattattagattgaaacgcgaggaggaaagcttggataatattaaacaatattatgta
aaatgcagtaatgaaaagcagaagtacaacgcagtcacaaatatttatggaacactgact
gttggacaagctattatattttgccaaactaggaaatctgcagcatggttggccgaaaag
atgtctaaggatggacacgctgtggctcttctatctggagaattaagtgttgaacagcga
attgcagttttggaccgttacaggtcgggcaaagagaaagttctaataacaaccaacgtc
ttatcgagaggtattgacgtagaacaagttacgatcgtcgtaaacttcgatctccctgta
aatgttcatggagatgcggattgcgaaacttacctacatagaattggtagaactggccgt
ttcggtaaacacggaattgcgatcaacttagtggatagcaatcaatcgcagcgtgtttgt
gaagacatcgaaagacatttcaacaagaaaattatgcttctaaatgccgaggattcagag
gagatcgagaagattggagtatag
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