Nicrophorus vespilloides (burying beetle): 108568625
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Entry
108568625 CDS
T04922
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108568625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108568625
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108568625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_CcmH_CycH
TPR_1
TPR_16
TPR_17
TPR_8
TPR_12
TPR_19
TPR_11
TPR_6
DUF7017
TPR_7
TPR_Slam
ANAPC3
ARM_TT21_5th
TPR_COPA_B
ARM_TT21_C
RPN7
TcdB_N
TPR-S
Motif
Other DBs
NCBI-GeneID:
108568625
NCBI-ProteinID:
XP_017785314
UniProt:
A0ABM1NER4
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MDIKSNLKDARDAIKNKDFEKSMKLCKSILREDKTNYMGLVFLGISLQEVGPIEQAPNAF
RKAIQQNATNILAWNGLLNFYEKVNNPQKNKDLIGIYCKLIELETNETKCIEIVQKFVDL
QVDDMDHKVVSIYNVANCDTVTVDLKLKIYASIVEVYRDIKDPQDIVKQIFEKCLLELIE
SGKASKEVYIEYLKFLYNNKKYENFMEEADKFTIMHGNNIHCFEWVCKVFNELYIERNSL
YEKYLENVKICLEELLELHSDSSIALLTKAIMFCIEDNLDEMKSYLHKVTLLRPGLLHAW
ILYTECFIKFHFYEDALEVAYKADKLLLSINNSKQSLRNILDNYMCLCLSQSNIPEELEK
CKVMCLKILENSDEVMIKKYLIEAYVKLEYWEKAEKCIDSCDEDIKPLLLAKLFRAKGFL
KKALGQLENFTLNSSEYWLELGEVYRDSEMYEKCLVPFLKAAKLDPNSYMCFLHLGEYYN
KINDMDKARRCYEKCFKINGKCSAAGIELSKIYRKQKMWGENLNLLENLASVRASRDNKW
AYLQLGLHFLEQEDYPNAITNFRYVVRVDSTNSHCWECLADAYLARGAYTSAIKCYQKAF
EIKPDSLYALLQVAHIKKVLNEYEEARSVFENVLNFNKNYVPALKGIAETCYYQGKNYHR
QQLHGLARDCVQYSIDKITVALKERPDLSCLWKIAADSSYLAAQLPEKYSCIMALSKLVS
GSDGDMNTVIDQEDLFKFAIRCYCKAINLTEDNMLIYHDLSCCYVSYSMYLTQAKERQEY
LDKALQVIYHCVNSNPNYWQHWNVLGNIAFVKDPKDLALAQHAFIKAVTLEHNSAVSWSN
LGTLYLYIGELKLANEAFSQAQRGDPNYVNSWIGQALIAESLGYNDSMDLFRHSTQLSAH
QQGALGYAYWVCKTLMDAPEDAVIYSIHNMHAIPVACDALTWYTDKNPFDSCAWNMLGIL
YERMGLKSNACKAFKKALQFSSLKNMDSINTNYGRSLLNIDKPEESVNAYRDVHEATFNS
GSGLALALFKDKKYQESYEAYESALHWLTEDEGYQSDLLVALASMAYLFQGPDEAKTLLL
QSTQLKQRSPWGLYATLSLGLLHNDLNLSLLVLNEMDELIDNKQALPHYGLLLSYIHLLQ
GETTKAIRELTKLVHRHPDQASLWLSLSVLLLRLHDEKPVSQSAAKCAEVAMALGQTKMD
VTKVLCIVSLASLFAGDLDKGLVAAQRAIHIYPNVAEGWAVLIFALHLLKKKMSKNFNVE
NLRKNVSFSKNLSDWISNVKI
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaatcgaatttgaaggatgcgagggatgcaattaagaacaaggatttcgag
aagtcgatgaaactatgcaagtcaatattacgagaggataagactaattatatgggatta
gtctttcttgggatttcgcttcaagaggtcggtcccattgaacaagcgcccaacgcattc
cgaaaagcaatccaacagaatgctacgaatattttggcttggaatgggctcttaaatttt
tacgaaaaagtaaataatccgcaaaagaacaaggatctaattgggatttactgtaaactg
atcgagctcgaaactaacgaaaccaaatgcatcgagatcgtccagaagttcgtggatttg
caggttgacgatatggaccataaggtcgtgtccatctacaacgtagctaattgcgataca
gttactgttgatttgaaattaaagatctatgcaagtatcgttgaggtctatagggatatc
aaggatccacaagacattgttaagcaaatatttgagaaatgtttattggaattgatagaa
agtgggaaagcttctaaagaggtatacatagaatacttgaaattcctatacaacaacaaa
aaatatgagaatttcatggaggaagcggacaagttcacaattatgcatggtaacaatatt
cactgttttgagtgggtatgcaaggtgttcaacgaattgtacatagaaagaaatagttta
tatgaaaaatatctggagaatgttaaaatttgcctggaagaattgttggagcttcatagc
gattccagcatagcgttgttgacgaaagcaatcatgttttgcatcgaagataatttagat
gaaatgaaaagttatctacataaagttaccttgttgagacccggtctgttgcacgcttgg
atcctctataccgaatgtttcattaagtttcacttttacgaagacgctttagaagtcgct
tataaagctgataagttactgttatcaataaataattccaagcagtcgttgcgaaatatt
ttggataactatatgtgtttgtgcttatcgcaaagtaacatccctgaagaattggaaaag
tgcaaagttatgtgcctgaagattttagaaaattccgatgaagtaatgattaagaagtat
ttgattgaagcctatgtcaagttggaatattgggagaaggccgaaaagtgtattgactca
tgcgatgaagacattaaaccacttctcttggcaaaattgtttagagctaagggtttcctg
aaaaaagcgttaggacagctggagaattttactttgaattcaagcgaatactggctggag
ttgggcgaagtttacagggattcggaaatgtacgagaaatgcctggtgccatttttgaag
gctgcaaagttagacccaaattcatatatgtgtttcctacatttaggagagtattacaat
aaaattaacgatatggataaggcgcggaggtgctacgagaagtgcttcaagatcaacggg
aaatgctctgccgcgggtatcgaattgagtaaaatttacaggaaacaaaaaatgtgggga
gaaaatttgaatttacttgaaaacttggccagcgtcagggcttctcgggataacaagtgg
gcgtatttgcaactaggtctacattttttggagcaagaggattatccgaatgctatcact
aacttcagatatgttgtgagagttgactcaacaaacagtcactgttgggaatgcttggca
gatgcgtatttagctcgaggagcatacacttctgccattaaatgttaccaaaaagcattt
gaaattaagccggattcgttgtatgctttactgcaagttgctcatattaagaaggtgttg
aacgaatacgaggaagctagatcagtttttgaaaatgttctgaatttcaataagaattac
gtgccggcattgaaggggatcgcggaaacttgttactatcaaggcaagaactatcacagg
cagcaattgcacggtctcgcaagggattgcgtccaatattcgatagataaaattactgta
gctttgaaggaaaggccagatttatcttgtctgtggaaaatagctgcggattcttcatat
ttggccgctcaacttccagaaaagtattcttgcattatggctctttctaaactggtttct
gggagcgatggcgatatgaataccgtcatcgatcaagaggatttgttcaaatttgcaata
cggtgttattgtaaagcgatcaacttgactgaggataatatgctcatttatcatgatcta
tcatgttgttacgtttcctactccatgtacttgacgcaagcaaaagagaggcaggagtat
ctggataaggctcttcaagtaatctaccattgtgtaaacagtaacccgaattattggcaa
cattggaatgtccttggaaacattgcgttcgttaaagatcccaaggatttggccttggca
cagcacgctttcatcaaggcagtaactttagagcacaacagcgccgtgtcttggagcaat
ttgggcacattgtatttgtacataggagaattgaagttggccaatgaggcgttttcgcaa
gcgcagagaggcgatcccaattatgtaaacagctggataggtcaggctttgattgccgaa
tctttgggttataacgattccatggatttgtttaggcacagcacgcaattatctgcacat
cagcaaggtgctctgggatacgcatattgggtttgcaagacgctgatggacgctccagag
gatgcagtaatctattccatacacaacatgcacgcaattcctgttgcgtgcgatgcatta
acttggtacacggataaaaatccatttgatagttgcgcttggaatatgctgggcatattg
tacgagcgcatgggtttaaagtcaaacgcctgcaaggccttcaagaaggccttacagttt
tctagtttgaagaatatggattccatcaacacgaattacggacgatcactgttgaacata
gacaaacctgaagaatcggtcaatgcatatcgtgacgtccacgaggctacctttaatagt
ggaagcggtcttgcactcgcattatttaaagataaaaaatatcaagaatcttatgaagcg
tatgaatctgcattgcattggttgacggaggatgaaggttaccaatcagatttgttagtt
gctctggcctcgatggcttacttatttcaaggtccagatgaagctaaaacgcttctactt
caaagcacgcaattgaaacaaagatcaccgtggggtttgtatgctacactatcattagga
ttattacacaacgatttgaatctatcccttttggttttgaatgaaatggatgaactgatt
gataataagcaagctttgccgcattacggactcctcttatcttacatacatttgttacag
ggtgaaacaacgaaagccattagagaactgaccaaattagtgcatcgtcatccagatcag
gcctcgctctggctatccttatccgtcttactcttgaggttgcacgatgagaaaccagtt
tctcagtctgctgctaaatgtgctgaagttgccatggctcttggtcaaacgaaaatggac
gttactaaagttttgtgtatcgtgtcgttagcatcgctgtttgccggtgatttagacaaa
ggacttgttgctgcccaaagggccatccacatttatccgaacgttgcagaaggctgggct
gtcctaatattcgcattgcatttgctcaaaaagaaaatgtcgaagaattttaatgtggaa
aatcttaggaagaacgtatccttttccaagaacctctccgattggataagtaacgtcaaa
atataa
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