Nicrophorus vespilloides (burying beetle): 108569113
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Entry
108569113 CDS
T04922
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108569113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108569113
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
108569113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
108569113
NCBI-ProteinID:
XP_017786027
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MSEEKVDTKCSEASSKIVEFKTLEEFRKYGFKAIVEATRNSNALPVNRDYNFYKTHESFN
KIINSEASHILSTINTILKKNDIQDNIKNRGIDEKIELVVEANDAILERVAMKIDEMNGL
RKLPEQPIIQTVRAELPINGSWNRVNKFTVDSAIHGNDQTKAIQLLAAKNIIRPQKFFKD
IIENSNNYPWKPRITEKPNSLKPLALYIEDSEFGEIYSHPYEVELEKFLPSEEFVCSCTP
EPPKPVKETPLYEVNTEEELNELLDVLRKQKEIAVDLEHHSYRSFMGITCLMQISTKDAD
YLIDTLALRDKLHVLNEIFTRNSIVKIFHGAEMDVQWLQRDLSLYVVNMFDTHKAAKQLG
YSGLSLAYLLQRFCSFVPNKQFQLADWRIRPLLEQLKAYAREDTHYLIYIYHMLKNELIK
MGNGNNNILKAVFQESTRVCMKRYVKPRLTENSHMDMYVKSKRLFNNKQLFALKHLYSWR
DAMAREEDESTGYILPNHMLLQISETLPREVQGILACCNPIPPLVRANAVELHQIILKAR
EQQLEKAIMKEDTRSRGAEKELVKLNIDSPLHCPHDLTRFPEFRDDLPTLLGCKTHTNRY
QKNIIEKDKSLCSIFNCEPTEDKPKKVSDREFLGPYERYKLIKNFIIDSDKSEEIPEAKG
KEIAENDEDDLSVQDRMAKLHDHYVKVKRIEEKKNEPKTLTEMGGSKKRKRDICESDFQP
FQENSDNPILTTIPFDKKNVQVDNDEQKVHTSVNSKRKCNLPESNNTPYKKSRDNDNEKT
IGGGKQSNKNHKQHQNRKFQKADDRSNQHIEDKNNDKQSPNDWWKSKTRKPNQSHNQFPS
GKINEGFKAFDYSSIDYKKQFQGGASQKGQHLFGTSFTGGKKKASHRGGSSKRGRGK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaaaaagttgatacaaagtgcagcgaagcaagctcaaaaatagttgaattt
aaaactctagaagaatttaggaagtatggttttaaggcaattgtagaagcaactaggaat
tctaatgcactaccagtaaaccgtgattataatttctataaaacacatgaatctttcaat
aaaatcataaacagtgaagcttcacatatcttgtcaacaataaacaccatactcaagaaa
aatgatattcaggataacattaaaaataggggtattgatgagaaaatcgagttggtggtt
gaagccaatgatgctatattggagagagttgcaatgaaaattgatgagatgaatggacta
aggaaactgcctgagcaaccaattatacaaacagtgcgggcagagttaccaatcaatggc
tcttggaatagagtgaataaatttaccgtagattcagcaatacatggaaatgatcagaca
aaagcaattcaacttttggctgcaaaaaatattataaggcctcagaagttcttcaaagac
attattgagaacagtaataattacccatggaaaccaagaattacagagaaacctaattca
ctaaaacctttggctttgtacattgaagattctgagtttggagagatttattctcatcca
tatgaggtggaattagaaaagtttttaccctcagaagaatttgtatgctcttgtacacct
gaaccacctaaacctgtcaaagagactccattatatgaagtaaatactgaagaagaacta
aatgaattattggatgtcttgaggaaacagaaagagattgcagtggatttagagcatcat
tcatatagatcatttatgggtatcacctgtttaatgcaaattagtacaaaggatgctgat
tatctaattgatacgttggctttgcgagataagttgcatgtattaaatgaaatttttacg
aggaatagcattgtcaaaattttccacggcgcagaaatggacgtgcaatggcttcaaagg
gatttgtccctgtacgttgtcaatatgttcgacacccataaagcagctaagcaattggga
tattccggattatctctggcttacttgttgcaaagattttgttcttttgtacctaataaa
caattccagttagctgattggaggataagaccattactcgagcaattgaaagcgtatgcc
cgcgaggacacccattatttgatatacatctaccatatgcttaaaaatgaattaattaaa
atgggaaatgggaataataacattttaaaagcggtatttcaagagagtacacgcgtgtgt
atgaagcgttacgtaaaacctagattgacggagaattctcatatggatatgtacgtaaaa
agcaagcgattatttaataataagcagttatttgcattgaagcatttatattcatggaga
gatgcaatggccagagaagaggatgagagtacaggatacattttgcctaatcacatgtta
ttgcaaatatcagaaacgttaccaagagaggtgcaaggaatattagcttgttgcaatcca
attccacctttggttcgtgccaatgcagtggaattacatcagattattttgaaggcgaga
gagcaacaactagaaaaggctattatgaaagaagatacgagaagcagaggcgctgaaaag
gaattagtaaaattgaatattgatagccctttgcattgccctcacgatttaaccagattc
ccagagttcagagatgatttgccaacattgttaggttgcaagacacataccaatcgttat
caaaaaaatataatagaaaaggataaatcgttgtgctcaatatttaattgcgaaccaacg
gaagataagccgaaaaaagtttcggatcgagaatttttgggtccgtacgagcgttacaag
ttaattaaaaactttataatagattcagataaatctgaggagataccggaggcgaaagga
aaagaaattgcggaaaacgacgaagatgatttatcagttcaagataggatggctaagttg
cacgatcattatgtgaaagttaagagaattgaagagaagaaaaatgaaccgaaaacgtta
actgaaatgggtggatccaagaaacgcaaacgggatatatgtgaatctgattttcaacca
ttccaagaaaattcagataatcccattcttacaacaattccgtttgacaaaaaaaacgtg
caggttgacaatgatgagcaaaaggtacatacaagtgtaaactcgaaacgaaaatgcaat
ttaccggaaagtaataatacaccgtataaaaagagtagagacaacgataacgaaaagaca
ataggaggtggaaagcaatctaataaaaatcacaagcaacatcagaacaggaaattccag
aaagcagacgatagaagtaatcaacatattgaggataaaaataatgacaaacagtcgccc
aacgattggtggaagtccaagacccggaaaccaaatcaaagccataatcaatttccctct
ggcaaaatcaatgagggattcaaagcatttgattattcaagcatcgattataaaaaacag
tttcaaggtggtgccagtcaaaaaggacaacatttgtttggcacttctttcactggaggg
aaaaagaaggcttcccatagaggaggatcgtctaaacgtggaagaggaaaataa
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