Nicrophorus vespilloides (burying beetle): 108569235
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Entry
108569235 CDS
T04922
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022
Basal transcription factors
nvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108569235
09124 Replication and repair
03420 Nucleotide excision repair
108569235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108569235
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108569235
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108569235
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108569235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF2205
Motif
Other DBs
NCBI-GeneID:
108569235
NCBI-ProteinID:
XP_017786193
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MTTSSEDVLLQVPQVKYKKGDGTLFLMDSRLAWMVENRDTVAVSHLYADIKTQKISPEGK
SKIQLQVVLHSGVSSTFHFTNRNGAQAQAQDRDRVKELLQNLLPKFKRKVDRELEEKNKL
LSTNPSLLQLYKDLVMTEVVSSEEFWAQHASQYTQKKNAQSQEIGVSGAFLADIKPQTDG
CNGLKYNITADIIECIFKTYPAVKKKYVEHVPAKLTESQFWTKFFQSHYFHRDRKYAESK
DVFTECGKIDDQEMKKDIQNGVDDPLVDITEFDDKFIDEGYGTQLEKSNVGNGTVSQAMI
KRFNQHSIMVLKATKSKPPENNVPQNGIEPKQQVLHPNGAVPATRTLEESNNLHKSKKQR
IHEKISYDDLDTSIDCKQNSIAQLNLSKVERYLHGPMPGSAIEHLSPNDVAAASRNMHQE
LKQWRSRLPTSALVSPAAAVGALGELSPGGALMRGFQEQSLAQLVPPDIEKEVRNLYLGL
CELLSHFWKCFPATSQASEQKLVKMHEALHRFHSAKIKPFEDKLIRELSPLSHNLTKHLN
QLLNAAYQKFSTWQKMKMNHR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacctccagtgaagatgtcttgctacaagttcctcaagtgaaatataaaaagggt
gacggaacccttttcctaatggactcaagattagcatggatggttgagaacagggatact
gtagcagtttcccacctgtacgctgacataaagacgcaaaaaatttcacctgagggtaaa
tcaaagatccaattgcaagtggttctacacagtggagtgtcctccactttccatttcacc
aatcgaaatggtgcccaggcgcaggctcaagacagggatcgagtgaaggagctgctacag
aatctattgccaaagtttaaaaggaaagtcgatagggaactcgaggagaagaataaactg
ttatccacaaatccatcgttgttgcaactgtataaagatctagtgatgacggaagtcgtt
tcttctgaagagttttgggcgcagcacgcaagccaatatacgcagaagaaaaatgcacag
tctcaggaaatcggcgtttcgggtgctttccttgctgacattaagccacagactgatggt
tgtaatggtcttaagtataatattacagcagacattattgaatgtatattcaagacatat
cctgctgtcaaaaagaaatatgtcgaacatgttcctgccaaattgactgaatctcagttt
tggacgaagtttttccaatcgcattatttccatagagataggaagtatgctgagagtaaa
gatgtgttcactgaatgtgggaaaattgatgatcaagagatgaagaaggacattcagaat
ggcgtggatgatccgctggttgatatcactgaatttgatgacaaatttatcgatgaaggc
tatgggacgcaattagagaagtccaacgttggtaatggcacagttagtcaggctatgatt
aaaaggttcaatcaacactcgattatggtgttgaaagcgacaaagagcaaacctccagaa
aataatgtaccgcagaatggtatagagccgaagcaacaggtccttcatccaaatggcgct
gtgcctgcaacccgcacgctggaagagagcaataatttacataaaagtaaaaagcaacgt
attcacgagaaaatcagttacgatgatttagatacgagtattgattgtaaacaaaattcg
atagctcaattaaacttatcaaaggtcgaaagatatttgcatggtccgatgccgggttct
gctatcgaacatttatcaccgaacgatgtggctgctgcctctaggaatatgcaccaggag
ctgaagcagtggcgaagtcgtttaccaacaagtgctcttgttagtcctgcagcagccgtt
ggtgctttgggcgaattatctccaggaggtgctctaatgagaggctttcaagaacaatca
ctggcacaacttgtaccgccagatattgaaaaggaagtacgtaatttatatttgggtctc
tgcgagttgctgagtcacttctggaagtgttttcctgcgacctcacaagcgagcgaacaa
aaattggtaaaaatgcacgaagcgctgcacagatttcattctgccaaaataaaaccattc
gaggataaacttatcagagaattatcaccattatcacataatttaacgaaacatctgaac
cagctactgaacgctgcctaccaaaaatttagcacctggcaaaaaatgaaaatgaaccat
cggtag
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