Nicrophorus vespilloides (burying beetle): 108569438
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Entry
108569438 CDS
T04922
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl04120
Ubiquitin mediated proteolysis
nvl04137
Mitophagy - animal
nvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108569438
04120 Ubiquitin mediated proteolysis
108569438
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108569438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvl04131
]
108569438
04121 Ubiquitin system [BR:
nvl04121
]
108569438
03029 Mitochondrial biogenesis [BR:
nvl03029
]
108569438
Enzymes [BR:
nvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108569438
Membrane trafficking [BR:
nvl04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108569438
Aggrephagy
Other aggrephagy associated proteins
108569438
Xenophagy
Other xenophagy associated proteins
108569438
Ubiquitin system [BR:
nvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108569438
Mitochondrial biogenesis [BR:
nvl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108569438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
108569438
NCBI-ProteinID:
XP_017786481
UniProt:
A0ABM1NI31
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSFLIDLVRNFLHSMLQLFSFGKNTISNTLNIYIKTNTGNTLSVNLDPQWDIKNVKDFVA
PKLGLQPEEVKIIFAGKELGDNVTIAECDLGQRSVLHAIKIKKRIKVPSQSNSLLEENEE
DSGSKPLCETLSDLTFTSDDDTSGNLNDSGRESLKVHFYVFCATCKSLKSGKLRVRCHFC
KSGAFTVHWDPQSWDDVLEPKRITGLCENNPQLCSDILDNKEPTFAEFFFKCSEHASLGE
SDEAVPLYLIRPNLRDVPCLACADICDPVFVFPCAERHVTCLDCFRQYCTTRLIDRQFWQ
HPELGYTLGCPTGCADSFISEIHHFRLLTDLQYTQYQRFATEEFVLQSGGVLCPQPGCGM
GILADADCTKITCLNGCGYVFCRMCLQGYHIGECQAAENVNINGDCSYNVDPIRAADARW
DEASKVAIKVLTKPCPKCRTPTERDGGCMHMVCTRAGCGFHWCWVCQIPWTTECMANHWF
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagttttttaattgatttagtaaggaattttctgcacagcatgctgcagttgttttcg
tttggcaaaaatacaatcagtaacacactgaacatttatatcaagacgaacactggtaac
actctgtcagtgaatctagatccacaatgggatatcaagaatgtaaaagactttgtagcc
ccaaagcttgggctgcaaccagaggaagtgaaaattatatttgctggcaaagaactggga
gataatgttacaattgctgaatgtgatttgggccaacggagtgtgttacatgcaattaag
attaagaaaagaatcaaagtcccaagtcagtcaaatagtttgttggaagagaatgaggaa
gattcaggatctaaaccattgtgtgaaacattatctgatttaacatttacttcagatgat
gacacatctggaaatttaaatgatagtggtagggaaagtttaaaagtgcatttctatgtg
ttttgtgcaacttgtaaatctctgaagtctggtaaacttcgagtgaggtgtcacttttgt
aagagtggtgcattcactgtacactgggatccacaaagttgggatgatgtgttggaacca
aagcgaataactggcttatgtgaaaataacccacaactatgttctgatattttagataat
aaggaaccaacatttgcagaattctttttcaaatgctctgaacatgcgtcgttaggggaa
agtgatgaagctgtacctttatatttgattagacctaatttgagagatgtcccttgttta
gcttgtgcggatatatgtgatccggtttttgtttttccttgcgccgaacgtcacgtaaca
tgcctagattgtttccgacaatactgtacaactcgtttaatagatagacaattctggcag
cacccagaactaggatatacattaggatgtcccactggatgtgctgattcctttataagc
gaaatacaccattttagattattgactgatctacagtacacccaataccaaaggtttgca
acagaagaattcgttttacaatctggtggagtattgtgtccacaacctggctgtggcatg
gggattttagctgacgcggactgcacaaaaataacgtgtcttaatggatgcggttatgtg
ttttgtagaatgtgcttgcaaggataccacattggagaatgccaggctgcagagaacgtt
aatatcaacggcgactgcagttataacgttgacccaattagggcagccgatgctagatgg
gatgaagcatcaaaagtggccatcaaagtcttaactaagccttgccctaaatgcagaaca
cccacagaacgggacggtggttgtatgcatatggtttgcacgagagcgggttgcggtttc
cattggtgttgggtttgtcagatcccatggacaacggaatgtatggcaaatcattggttt
ggctaa
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