KEGG   Nicrophorus vespilloides (burying beetle): 108569614
Entry
108569614         CDS       T04922                                 
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
nvl  Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:nvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nvl04121]
    108569614
Ubiquitin system [BR:nvl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108569614
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 108569614
NCBI-ProteinID: XP_017786760
LinkDB
Position
Unknown
AA seq 610 aa
MDEMEKPDLLWDTVNVNTNIAKLLAGRELGEDKGTAMQKKFHFTTSLLKRFALESQLEGH
QGCVNCLQWSADGRYLASGSDDTNVRIWDPFANRCLHVIPTKHVGNIFSVKFVGDGSMVA
TGAGDCKVIVQSIENNEKQAIMDCICHAGRVKRLATAPDQPHLFWTAAEDGLILQYDLRE
QHDCLKCNTVFVNLSEVTELKCITVNPTKPHLIAAGANDSYVRLYDRRMIKTTKCQVRMG
VRTSEFQDANCVQYYAPGHLAKDNGGEHSYKLAATYVTFDSTGNDLLVNMGGEHIYLFNI
NDNRHVNQMSAPDCLPKPKKLPPIKPCCLTKDDNKMKSEHEYNYKIVNKKACACDYICRA
RRLFLRKWIGDMYFAARDYLHTVQQWPDCEMAYFGLIECLISLKWPEEATNWINHFQAKF
PHNSEICNYLQVAVNKLSASPKPSADELSETIEVMEVLTVSDEEKAMRLNSIDFESRYIG
HCNTTTDIKEANFMGDDGNFICGGSDDGMIFIWDRKTSNLLTRFEADKSIVNCVQPHPSI
SCIASSGIDPVVKIWAPKDEDDKNYTNRCKDPWSALRANQDRMKISPFETMLMNMGYNNP
HTHVGTCRTS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggatgagatggagaagccggacctcctgtgggacactgtcaatgtgaacacgaacatt
gcgaagctccttgctggtagggagctgggtgaggacaagggtacagcgatgcagaagaag
ttccacttcacaacttctttgctgaagagatttgccttggagtcgcagctggaggggcat
cagggctgtgtcaattgtttgcagtggagtgctgatggcaggtatctggcatcaggctcg
gatgacacgaatgtcaggatctgggatccgtttgcgaacaggtgcttgcatgtgataccc
accaaacatgttggtaatatattctcggttaaatttgttggtgatggatctatggtggct
actggggctggagactgtaaagtcattgtgcagagcatcgaaaataatgagaagcaggct
atcatggactgcatctgtcatgctggaagggtcaaaaggttggccactgcacctgatcag
cctcatttgttctggactgcagcagaggatggcttaattctacaatacgatttgcgagag
cagcacgattgtctgaaatgcaacacggtgttcgtcaatttgagtgaggtaaccgaacta
aaatgcatcaccgtgaatccgacgaagccgcatctgatcgcagctggggcgaacgacagt
tacgtgaggctctacgatcgcaggatgatcaaaacaacgaagtgccaggtgaggatgggc
gttcgcacttccgaattccaggatgcgaactgcgtgcagtactacgcacccggacaccta
gctaaagataacggcggagagcacagctacaagttggccgccacctacgtaaccttcgac
tcgacggggaacgacctcctggtgaacatgggcggcgaacatatatacctcttcaacata
aacgacaaccgtcacgtcaatcagatgagcgctccggactgcctgccgaaacctaagaag
ctaccgccgatcaaaccctgctgtctcaccaaagacgataacaagatgaagtccgagcac
gagtacaattacaagatagtcaataagaaggcgtgcgcctgcgattacatatgccgagcg
aggcggctgttcttgagaaaatggattggtgatatgtattttgcagcgcgcgactatctg
cacaccgtgcagcagtggcccgattgcgagatggcatacttcggacttatcgagtgtctg
atcagcctgaagtggcccgaagaagctaccaattggataaatcacttccaggcgaagttc
ccgcacaactcggagatctgcaattacttgcaggtggcagtgaacaagctgagcgcttcg
ccgaagccgtctgccgacgagttatccgaaaccatcgaggtgatggaagttctgacggtg
agcgatgaggagaaggcgatgcgcttgaactcgatcgatttcgagtcgagatatatcggg
cactgcaacacgacgacggacatcaaggaggccaacttcatgggtgatgatggtaacttt
atttgcggcggctccgatgacggtatgatcttcatatgggataggaagaccagcaatctt
ctgactagattcgaggctgacaaatcgatcgtcaattgcgtccagccgcatcccagcatc
agctgcatcgcttccagcggcattgatccggtcgttaagatttgggcgcccaaggatgag
gacgacaagaattacaccaatcgctgtaaagatccgtggagcgcgctcagggccaaccag
gaccgcatgaagatcagcccgttcgagacgatgctcatgaatatgggctacaacaatcct
cacacgcacgtgggtacctgccgcactagttaa

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