Nicrophorus vespilloides (burying beetle): 108569617
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Entry
108569617 CDS
T04922
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03013
Nucleocytoplasmic transport
nvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108569617
03015 mRNA surveillance pathway
108569617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108569617
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108569617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108569617
NCBI-ProteinID:
XP_017786724
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MDGNSQEVTEPPPKAETVETPAEQDDGLKVADNMGALEEEPVQECVEVVEAETIKKSSTN
QSEYDSADSDVEHEEDTLLTHSDHSGSDAGSIILEREEGDGQESAPTKKVDDDEDKKNPQ
YIPKRGTFYEHDDRTADDDIEAEAVESEEKVDKDGKKKMWTEKKEKWNHDKFNDNEQMPK
SRSELISIYGYDIRNEEGPPRARRRRRYGRGPNKYTRNWEDEDAYSKPATPVNTKKPARK
SKTSPQLNQKDEENANAEENTTNSGRQSSESQNERTSISEQNTSAPQQPMVQKTREFTPK
NNSSHQHPPHHHHPSQNDRQNNKNHNRIGTGRVIKPNRDIKDSDYKGFTKSRQFTPRTQK
DMGRDKEAPHSQNYGNKRSTHEIEKEMGKLSVQEQVYAKGGNKQHGGNRQGSIPPRMQGE
PKGGSKRYSSIRQRSLPESANPPTFNQQHGYYGNAEYGQNQQQPGGQQSQQQPLLQHPPA
PLHPNPAQMPAIPPPPLPTLPPQVPVTTTPLPPQFGAPFAQAPPPFLQAAPPPFIPQQTP
QIINYVQGQPQFAPHQAPYQGYQQPFNPVSQPTEIFQPPGGITYYSAQDQQVTQRAAPQK
RPKAAIPIVPPPPLEPRGRGRATQEAVTPNASDVESKVEVVPAGNSNYEDAGAAAAVAVE
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaattcgcaagaagtgacggagccaccaccaaaggccgagaccgtggagacg
ccagcagaacaggacgatgggctgaaggttgcagacaatatgggtgctctcgaggaggaa
ccagtgcaagaatgtgtggaagtggtggaggctgagactattaagaagtcatcaacaaac
caatcagaatatgatagtgcagatagtgatgttgaacatgaagaagacacattgttgaca
cattcagatcatagtggaagtgatgctggcagtattatattggaaagagaagagggtgat
ggacaggagagtgccccaaccaagaaggttgatgatgatgaggacaagaagaacccacaa
tatatccctaagagaggaactttctatgagcatgatgacagaacagcagatgatgatatt
gaagctgaagctgttgagagtgaagagaaagtagacaaggatgggaaaaagaagatgtgg
actgagaagaaggagaagtggaaccatgataaatttaatgacaatgagcagatgcctaag
agcaggtctgaattaatttccatctatggttatgatatcaggaatgaagagggacctcca
agagctagaaggaggaggcgttatggacgaggtcctaacaagtatactcgcaactgggaa
gacgaagatgcgtacagcaagccggctacaccggtcaacacgaagaaacccgctagaaaa
tctaaaacgagtcctcaattaaaccaaaaggacgaggagaacgcaaacgctgaagagaat
accacgaatagcggacgtcaatcttctgagagtcaaaatgagaggacctcgataagtgag
cagaacacttcagcaccgcaacagccgatggtgcagaaaactagagaatttactcctaag
aataactcgagtcatcaacatccgccacatcaccatcatccatcacagaacgatagacaa
aataataaaaatcacaatagaataggtactggaagagttatcaaaccgaatagagatatc
aaggattccgattataagggtttcactaagtcccgtcaatttacgccgagaactcagaag
gatatgggacgggacaaggaagccccgcatagccagaactatggcaacaaacgttcgact
catgagatcgaaaaggaaatgggaaaactgagtgtgcaagagcaggtgtacgccaagggt
ggcaataagcaacacggtggtaacaggcaaggcagcattccgccacgtatgcaaggagaa
ccgaagggcggatcgaagaggtacagctccattcgacaaagatcgttgccagagtcggcg
aatccgccaacattcaatcagcaacatggatattatgggaacgccgagtacggtcaaaac
cagcagcaaccgggtggtcagcagtcgcaacagcagccactgctgcaacatccgcccgcc
ccgttgcatccgaaccccgcccagatgcccgcaattcctccgccgcccctaccgacactt
ccaccgcaagtccccgtcacgaccacgcctctgcctcctcaattcggcgctccttttgct
caagctccgcccccgttcttgcaagccgccccgcctccattcatcccgcaacaaacccca
cagatcattaactacgttcagggtcaaccccaattcgcgccacaccaggcaccatatcaa
ggatatcagcaacccttcaatccagtgagtcaaccaactgagatattccaacctccaggt
ggaatcacttattattccgcgcaggatcagcaagtgacgcaaagggctgctcctcagaag
cgtccaaaggcggccatccccattgtccccccgcctcctctggaacctcgaggcagaggg
cgtgcgactcaggaggcggtgacgccgaatgcgtctgacgttgaatcaaaggtggaagtg
gtgcccgcgggcaacagcaattacgaggatgccggtgcggccgccgcagtggccgtggaa
caatga
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