Nicrophorus vespilloides (burying beetle): 108569748
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Entry
108569748 CDS
T04922
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108569748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108569748
03012 Translation factors [BR:
nvl03012
]
108569748
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108569748
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108569748
Translation factors [BR:
nvl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108569748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_22
nSTAND3
AAA_19
NACHT
NPHP3_N
ATPase
ResIII
AAA_14
ABC_tran
AAA_16
TsaE
NB-ARC
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
108569748
NCBI-ProteinID:
XP_017786910
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MSGQAGFFAERNKRGKKFGNHNKNLRKRSSSPSPSAETMDNSKHPKHLKGREIGMYYAFL
SKQKNKKVSIKPIGNVLLPESKQKEIQKLLEATKDAPFNKHNVNSKFETNFMKVLHGNIN
DKLSEVKTFESNKNADQLLQIEYSKKQTDPKYRHMQQQRQRLPAYKMRSEILKAVAENQV
VIISGETGCGKTTQVSQFILDSHMEAGTGSQCCIICSQPRRISAISVAERVAEERAEDLG
QSVGYQIRLENVLPRNRGSITFCTTGVILKKMETNLSLSGISHLILDEIHERDVQSDFLI
TLLKEVIKKRKDLKVILMSATLNAKAFGDYFKVATLTEIPGFTYEVTEYYLEDVIHMTNF
EFPPDNRRFLKNKNADFEALIEPYVRKLMRDKEYPRRVCNELMKKGSEELNLDLIMELII
MICNKEKDPGAILVFLTGYSEISQLNTMMSKSGKFSKHRYLIIPLHSQMPSVEQKFIFRP
PPPGVRKIILSTNIAETSITIDDVVFVIDCGKIKISNFKVETNQQTLMPEWVSIANANQR
RGRAGRVKPGICYHLFSRGRQQYMEAYQKPEILRKRLEDVILMLKLLQLGKADAFLESLM
NPPDSEAVSVSLDLLKRMNALDESENLTPLGFHLARLPVSPQIGKMILLGSIFSCLNPIL
SVAASLDFKDAFMMPLGCERNVDQVKVKLANGNMSDHMIFHEAMTIFERTNNKKQFCWDH
YLSHTTMNLLENMKKQFAEYLFDLNFVPNSNPKCSECNENSGNISLVKAVICAGLYPNVI
VNNHKFSKHGVINRFQTLDRKKVKLHPKSVLNQVEIFESPLIVYYLKMKSSNDFIHDGTV
VHPLSLLFFGDRFAEHNERNDKHSISVNEGLRFWCSEGTGNIIAALRDRMNLFLKWKVAH
PGYVNWSSDEDGEIKTLRAIMELITSEECGRNEHDPDESLDEDND
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacaagcagggttttttgcagaaaggaataaaaggggtaagaaattcggcaat
cacaacaagaatctgaggaagagatcgtcgtctccttcaccctctgcagagacgatggac
aactccaaacatccaaaacatctcaaaggcagggagattggaatgtactatgcatttcta
tccaagcagaagaacaagaaggtctccataaaaccgattggaaatgtgttattgccagag
tcgaagcagaaggagattcaaaaattgttagaagcaacaaaagatgcaccattcaacaaa
cacaatgtgaactccaagtttgaaacgaatttcatgaaggtcctccatggtaatatcaat
gataaactgtctgaagtgaaaacatttgagtcaaacaaaaatgcagaccagttattgcaa
attgagtattccaagaagcagactgatccgaagtacagacatatgcagcagcaaaggcag
agactgcctgcatataaaatgcgctctgaaatattgaaagctgttgctgaaaatcaagtt
gttatcatcagtggtgaaactggctgtggaaaaaccacacaggtgtctcagttcatcctt
gactcacatatggaagcagggactggatctcaatgctgcatcatttgttcacagccaaga
aggatttcagctatttctgtggctgagagagtagctgaagaaagggctgaggatttggga
caaagtgttggatatcaaattcgtctggaaaacgttttgccaagaaatcgcgggtctata
actttttgcacgactggtgtaattttaaagaagatggaaactaatttgagtttatctggt
atctcgcatttgatactcgatgaaatccacgaacgcgacgtacaatcagattttctgata
actctgttgaaagaagtcatcaagaagcgtaaagatctgaaagtgattctgatgagtgcc
acattgaacgcgaaagcatttggcgattatttcaaggttgcgactctaactgaaatacct
gggttcacctatgaagtcaccgaatactatttggaggacgttattcatatgactaacttc
gagtttccacctgacaatcgaagatttttaaagaataagaacgcagatttcgaagcactt
atcgagccttacgttaggaagctgatgagagacaaggagtatccgagacgtgtgtgcaac
gagttgatgaagaaaggttcagaagagttgaacttggatttgatcatggagctgatcatc
atgatttgtaacaaggaaaaagatccgggagcaattctggtattcctgactggttacagc
gagatttcccaactgaacacgatgatgtccaagtctgggaagttttccaaacaccgatac
ctaattattcctttgcattcgcaaatgccatcagtggaacaaaagttcatctttcggcca
cctccgccgggcgtgaggaagattatcctctccacaaacatcgcagaaacgagtataacc
attgacgatgttgtctttgtcatagactgtggaaaaatcaagataagcaattttaaagtc
gagactaatcaacaaacgttgatgcccgaatgggtttctattgccaatgcgaatcaaaga
cgcggtcgagcgggtcgtgtaaaaccaggaatttgctaccatttattctctcgtggcagg
caacagtatatggaggcatatcagaaaccagaaattttaagaaaacgactcgaagatgtt
atattgatgctgaaactattgcagctcggcaaagcggatgcgtttctggaatctttgatg
aacccaccagattcagaagccgtttcggtttcgcttgatctgctgaaaaggatgaacgcg
ttggacgagagcgagaatttaacaccgttaggattccatttggctcgattgccggtcagt
ccgcaaattggaaagatgatcttgctgggctcgattttcagctgcctgaatccaattctt
tcggtggcggcgtctttagattttaaagacgcattcatgatgccgctcggctgcgaaagg
aatgtagatcaggtgaaggtgaaattggctaatggcaatatgagtgaccacatgatattc
cacgaagccatgactatattcgagcgtacgaataacaagaaacaattctgctgggaccat
tatcttagccataccacaatgaaccttctggagaacatgaagaaacagtttgccgaatat
ttattcgacttgaatttcgtgcccaactcaaacccaaagtgttcagagtgcaatgagaac
agcggaaacatcagtttggtgaaggctgtcatctgcgctggactatatcccaatgtgatt
gtaaataatcacaaattcagcaagcacggtgttatcaaccgtttccagacactggacagg
aagaaggtgaagctgcatccgaaatcggttttaaatcaagtagaaatcttcgaatctcca
ctcatcgtgtattatctcaagatgaaatcgagcaatgatttcatccacgatggaaccgtg
gtccatccactttcactcttgttcttcggagatagattcgcggagcataacgagaggaat
gataagcattctattagcgttaacgaagggttgaggttttggtgcagcgagggaactgga
aatataattgctgctttgagggacaggatgaatcttttcctgaaatggaaagtggctcat
cctggttacgtcaattggtcttcagatgaagacggagaaataaaaacgttaagggcaatc
atggaattaatcacaagcgaagaatgtggacgcaatgagcatgacccggacgagagtttg
gacgaagataatgattaa
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