Nicrophorus vespilloides (burying beetle): 108569906
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Entry
108569906 CDS
T04922
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108569906
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108569906
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108569906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-C2H2_DHX34
OB_NTP_bind
HA2_C
AAA_22
nSTAND3
HA2_N
AAA_19
AAA_14
Rad17
ATPase
AAA_16
zf_UBZ
DUF6282
Motif
Other DBs
NCBI-GeneID:
108569906
NCBI-ProteinID:
XP_017787147
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MGRKSNYSEPSSSKQRHDHKRRREDNEDVKSKKHSTVDIIFYKYDLNNFLEDHCSIKKSD
DFWTFYAKYSAAQELKKTKGITFDSSKLLNIDFAKPAKVLYEKLPLYTKQGEKMHIPYNK
FLVLYSAMRTYQDFQQKMNFAKLKALRNAQKDLPIAHYKEDIIKKVQDNKVILIAGDTGC
GKSTQVAQYMMEAGFKRIACTQPRRIACVALAKRVAYETLATYKNKIGFQIRFEKAKNKG
TNVIFLTEGILLRQAGDDVMSTYDALILDEVHERHLNMDFLVGIMKCLLHKRDFKLILMS
ATINLQLFEAYFESEGVKTIKVPGRLYPIELHYKPIIKDPYDKKKSKFDCQPYLNILELI
DQKYKPQEKGDVLIFLNGFNEINTLASAVESYAEIKKNWIVLQLHSTLSLEDQDKVFFAP
PDGVRKCIISTNIAETSVTIDGVRFVIDSGKVNRMIYENCGINKLFESNISQDSAKQRSG
RAGRTGPGICYRLYSEKDLKSYELFTPAEIHLVPLENLVLNMVTLGLSDIEAFPFLEKPK
ESTLRAAMERLSFLEALKTDDSGLSLTTLGNSMSQLPVDLTVAKMLIMSTIFGTVNAVLA
LASLLSVQNPLMESKFYETRDCRAPYESDHGEPITLLNLYKGWLQVKRTGEQSRNWTKSR
GVEEQRFYEVTKLIEQFRDILQDSNLIPKLDNEVMSSSERVIRKGELKRLRDLRRELKTD
SRDTKRKKLEMYNKEDDDTKDIKDLRDVEFRISNDFNKLQQLLSETRTDSFKDLMLLKLI
LTGALYPQVAIEDEFNCSKTVNERLYHTKIKSYVFLRPTSYFTLNPTFLELNDSDIDVPP
NGYFSKKPLSRKHQLLVFQKVLETKKTYLMNAFRMPALQTLLLFGRVIGTNRTLTKFVFD
DFILVNCPFLWQGKVMLLKSINLRKRCKAALEKKLNEKEIDDTELVNDMIEFMQANISYN
IKRLLPADIKVIYTRERSMEMKENPFDKDFEPAENELGGFNVSPNVIYNCLESDGYDIEA
ENSLILTPCPKCGTASLNFLLYLAHDEICNKDDPKKVVASKTYEAPKPNSRNYNCDRCGK
TMLVTPVEFLRHKKICANIKIEKV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaaatcgaattattctgaacccagcagttcgaaacaaagacatgatcataaa
aggagacgagaagacaatgaagatgttaaatcgaagaaacattccactgtggatataatt
ttttataaatacgacttgaacaactttttagaggatcattgttcaataaagaagagtgat
gatttctggacgttttatgctaaatattcggcagcacaagaactgaagaaaaccaaaggt
ataacatttgatagtagcaaattactgaatattgattttgcaaaaccagccaaagttttg
tatgagaaattacctctgtatacgaagcaaggagaaaagatgcacataccttacaacaag
tttctagtattatacagtgcaatgagaacatatcaggatttccagcagaagatgaatttt
gccaaattgaaagctttaaggaatgcacaaaaggatttaccaattgcacactacaaagag
gatataattaaaaaagtgcaggataataaagtaattttgattgctggtgatacaggctgt
ggtaaatctacacaagttgctcaatacatgatggaggctggcttcaaaaggatagcatgc
acacagccaaggagaatagcttgtgttgctttagcaaaaagggtagcttatgaaacgttg
gccacttacaaaaataaaattggctttcaaattcgttttgagaaggccaaaaataaaggc
actaatgttattttcttaacagaaggtattctgttgaggcaggcgggtgacgacgtgatg
agcacttacgatgctcttatattggatgaagtacacgagcggcatctgaacatggatttc
cttgttggaattatgaaatgcctgctccataagcgtgacttcaagctaatcctcatgtcc
gctacaattaatctgcaacttttcgaagcgtatttcgagtctgaaggtgtgaaaaccatc
aaagtaccaggaaggttgtatccgattgaacttcattataaacctataattaaggatcct
tacgataaaaagaaatcgaaatttgattgccaaccatatctgaatatcctggagctcata
gatcagaagtacaaaccgcaagagaaaggagacgttcttattttcttgaacggtttcaac
gagattaacacattggcgagtgcagtcgagtcttacgctgaaattaaaaagaattggata
gtattgcagctacatagtaccttgtctttagaagaccaggataaagtgttttttgctcct
cctgatggtgttagaaaatgcattatttccacgaacattgccgaaactagtgttacgatt
gatggtgtaagattcgtgattgattccgggaaagtgaatcgtatgatttacgagaattgc
ggaatcaataaactctttgaaagtaacatttctcaggacagtgcgaagcaaagatctggc
agagctggaaggactggtcctggtatatgttacagattatattcagagaaagatctgaag
agctacgagttgttcacaccagctgaaatacatttggttcctttagaaaatttggtttta
aatatggtcaccttaggtttaagtgatatcgaagcatttccttttctcgaaaaacccaaa
gaaagtacgttgcgtgcagcaatggaaagactttcgtttctcgaagcattaaagacggat
gattctggtttatccttaacaactttagggaattccatgagtcaattaccagtggatctg
actgttgctaaaatgcttattatgtctacaatatttggtacagtcaacgccgttttggct
ttggccagtttattaagcgtgcagaatccgttaatggaatctaaattctatgaaactaga
gattgtagggctccatatgaatccgatcacggagagcctataacattattgaacttgtat
aaaggatggttacaagttaaaaggactggagaacaatccaggaattggacgaaaagtcgc
ggtgtcgaagagcagcggttttatgaagtgacaaagttgatcgagcagtttcgtgatatt
ctacaggattcaaatttgattccgaaattggataatgaagttatgagcagttcggaacgt
gttattcgcaaaggtgaattgaagcgacttcgagatttgagaagggaattgaaaacggat
tcgcgggatacgaagaggaagaaattggaaatgtataacaaagaggacgatgatacgaaa
gatataaaagatttacgagatgtcgagtttcgtattagtaatgatttcaataaactgcag
cagcttttatctgaaacgaggacggattcgtttaaggatttgatgcttttgaagttgatc
ttgacaggcgctttgtatcctcaagtcgctatcgaagatgagtttaattgttctaaaact
gttaacgaacgtctctaccacactaagatcaagagttatgtgtttcttcgacctaccagt
tacttcacactaaatccgactttcttggaattgaatgattctgatattgatgtgcctccg
aatggatacttcagtaagaaacctttgagtcggaaacatcaactgttggtgttccagaag
gttttggagacgaagaagacttacttgatgaacgcgtttcgcatgcctgctttgcaaact
ttgcttcttttcgggcgagttattgggacaaaccgaacactcacaaaattcgttttcgac
gatttcatcttggtgaattgtcccttcttgtggcaaggaaaagttatgcttctcaaatct
ataaatttgagaaaacgctgcaaagctgctttggagaagaaactgaacgagaaagaaatc
gacgacacggaattggttaacgatatgatcgaatttatgcaggccaacataagttacaat
ataaagcgattgttacctgcagacataaaagtcatttatactagagagagaagtatggaa
atgaaagagaatcctttcgataaagatttcgaaccagctgaaaacgaattgggtggattt
aacgtaagccctaacgtgatttacaattgcctggaatctgatggttacgatatagaagca
gaaaactctttgatcttaacgccatgtccaaaatgcggaacagcaagcctcaacttcttg
ctgtatttagcacacgatgaaatctgcaataaggatgacccgaagaaggtagtcgcatct
aaaacatatgaagcacctaaaccgaattctcggaattacaactgcgatagatgcgggaaa
acgatgttggtaactccggtggagttcctgcgtcacaagaaaatttgcgcaaatattaaa
atcgagaaagtttaa
DBGET
integrated database retrieval system
