Nitrososphaera viennensis: NVIE_002910
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Entry
NVIE_002910 CDS
T03200
Symbol
fen
Name
(GenBank) flap structure-specific endonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn03030
DNA replication
nvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NVIE_002910 (fen)
03410 Base excision repair
NVIE_002910 (fen)
03450 Non-homologous end-joining
NVIE_002910 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvn03032
]
NVIE_002910 (fen)
03400 DNA repair and recombination proteins [BR:
nvn03400
]
NVIE_002910 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvn04147
]
NVIE_002910 (fen)
DNA replication proteins [BR:
nvn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NVIE_002910 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NVIE_002910 (fen)
DNA repair and recombination proteins [BR:
nvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NVIE_002910 (fen)
Exosome [BR:
nvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NVIE_002910 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIC14478
UniProt:
A0A060HFX3
LinkDB
All DBs
Position
complement(247087..248112)
Genome browser
AA seq
341 aa
AA seq
DB search
MGLDLKPLITSTPIKLAELSGKVVAIDAFNTIYQFLSTIRGPTGELLMNGRGEVTSHLSG
LFYRNVNLLAENIKPVYVFDGKMHALKAQEIERRSKLKQEAVAQYNHALEEGRMEDAVKY
GKRTSVLTDSMVEESKMLLAALGIPYVQAPADGEAAAAHLTKTGVAYASASQDYDSILFG
ARRLVRNLAASGRRKVPGKNTYIDVEPEIIEHDNVLKETGLTHEQLVDVGILIGTDFNPG
GFPGIGPKTAIKLIKENGRLENVEKVKSQLAEVPYQEIRDIFLKPEVPKSDGVSFGEVSR
EKILDFLCVQKSFSTDRVAGMLDKLQKAQESRSQSLEKWFG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggggcttgacctaaagccgctcataacctcgacgccgataaagctggcagaactgtcg
ggcaaggtagttgccattgacgctttcaacaccatctaccagttcctctccaccatccgc
gggcctacgggcgagctcctgatgaacggcaggggagaggtgacgagccacctcagcggt
ctcttttacaggaacgtcaacctgcttgcagaaaacatcaagccggtgtacgtctttgac
ggcaagatgcacgcgctcaaggcgcaggagatagagcgcaggtccaaactcaagcaggag
gcggtcgcgcagtacaaccatgcgctggaagaaggcaggatggaagacgcggtgaaatac
ggcaagcgcacgtccgtcctgacagacagcatggtggaagaatcaaaaatgctgttggct
gcgcttggcataccgtacgtgcaggcgccggccgacggcgaggctgccgcggcgcacctg
acaaagacgggcgtggcgtacgcgtctgcaagccaggattacgattcaatactgtttggc
gcaagaaggctggtgcgcaaccttgccgcgtcgggcaggcgcaaggtccccggcaagaac
acctacatcgacgtcgagccagagataatagagcacgacaacgtgctgaaggagaccggc
cttacgcacgagcaactggtagacgtgggcatactcattggcaccgactttaaccccggc
gggtttcccggcatcggccccaagacggctataaaactgataaaggaaaacggcaggctt
gaaaacgtagagaaggtaaagagccagcttgcagaggtcccgtaccaggagatacgcgac
atctttctaaagccggaggtgccaaaatcagacggcgtcagctttggagaggtcagccgc
gaaaagatcttggattttctgtgcgtgcaaaagagcttttcaaccgacagggtcgccggc
atgcttgacaagctgcaaaaggcgcaggaaagccggagccagtcgcttgaaaagtggttt
ggataa
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