Nitrososphaera viennensis: NVIE_003750
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Entry
NVIE_003750 CDS
T03200
Symbol
rpoE''
Name
(GenBank) DNA-directed RNA polymerase, subunit E``
KO
K15171
transcription elongation factor SPT4
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NVIE_003750 (rpoE'')
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvn03021
]
NVIE_003750 (rpoE'')
03019 Messenger RNA biogenesis [BR:
nvn03019
]
NVIE_003750 (rpoE'')
Transcription machinery [BR:
nvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NVIE_003750 (rpoE'')
RNA polymerase I system
NVIE_003750 (rpoE'')
Messenger RNA biogenesis [BR:
nvn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NVIE_003750 (rpoE'')
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
EGF_LMN_ATRN
DZR
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AIC14567
UniProt:
A0A060HMY0
LinkDB
All DBs
Position
complement(320366..320554)
Genome browser
AA seq
62 aa
AA seq
DB search
MAKEKACRKCKALTSGKVCPVCKSTDLSPDWSGIILVFDPAKSLVASTLEITTPSRYALK
VQ
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaaaaggcttgcagaaagtgcaaggccctcaccagcggcaaggtgtgcccc
gtgtgcaagtcgacggacctgagcccagactggtcaggcatcattctggtgtttgaccct
gcaaagtcgcttgtggcaagcactcttgaaataaccaccccaagcaggtacgcgctgaag
gtccagtaa
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