Nitrososphaera viennensis: NVIE_005880
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Entry
NVIE_005880 CDS
T03200
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NVIE_005880 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvn03400
]
NVIE_005880 (nfo)
Enzymes [BR:
nvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NVIE_005880 (nfo)
DNA repair and recombination proteins [BR:
nvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NVIE_005880 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIC14790
UniProt:
A0A060HHG5
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All DBs
Position
complement(477164..478027)
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AA seq
287 aa
AA seq
DB search
MNAGYKVGFHVSIAGGISNSVDNAKGIGCSAFQIFSRNPRGWAAKPLAPGDVAAFKDKMA
ASGIDRTSTVVHMPYLPNLSGPAGEMYAKSVDTLAGEIQRAGELGIPYLVIHLGSHLGKG
SEAGMSQLVNAITTARDRAKKKGEGVTVLLENNAGQKNSIGATFEELRAILDRLDSSGVG
VCLDTCHAFASGYDLRTAKDVEKTLGAFDKTIGLKELKVVHLNDSKGPLGSNLDRHEHIG
LGSIGREGIAAFLCHKAIASLPIIMETPIDEKRDDAKNLKAFCELVS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccggctacaaggtgggctttcacgtttccattgcgggaggaatatcaaattcc
gtggacaatgccaagggcatcggctgcagcgcgtttcagatattcagccggaacccgcgg
ggatgggcagcaaagcccttggcgcccggcgacgtggcggcattcaaggacaagatggct
gcaagcggcatcgacaggacctcgaccgtggtgcacatgccgtacctgcccaacctgtca
gggcctgccggcgagatgtacgcaaaatccgtagacacgcttgccggcgagatccagcgc
gcaggcgagcttggcatcccgtaccttgtcatacaccttggaagccacctcggcaagggt
tcagaagccggcatgagccagcttgtaaacgccatcacgactgcccgcgacagggccaag
aaaaagggcgagggcgtgaccgtgcttttggagaacaatgcgggccagaaaaacagcatc
ggcgcgacgtttgaggagctgcgcgccatcctcgacaggctggacagcagcggggttgga
gtctgcctcgacacatgccacgcgtttgcgtcaggctatgacctgcggaccgcaaaagac
gtcgaaaagacgctgggcgcgtttgataagaccatcggcctcaaggaactaaaggtggtg
cacctgaacgactctaaaggcccccttggctcaaaccttgacaggcacgagcacattgga
cttggcagcatcggcagggaaggcatcgcggcttttctatgccacaaggcgattgcgtcg
ctgccgataataatggagaccccgattgacgaaaagagggacgacgccaagaacctaaag
gcgttctgcgagctagttagctag
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