Nitrososphaera viennensis: NVIE_006950
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Entry
NVIE_006950 CDS
T03200
Symbol
tfb2
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NVIE_006950 (tfb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvn03021
]
NVIE_006950 (tfb2)
Transcription machinery [BR:
nvn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NVIE_006950 (tfb2)
Prokaryotic type
Archaeal type
TFB
NVIE_006950 (tfb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AIC14903
UniProt:
A0A060HH92
LinkDB
All DBs
Position
complement(567238..568266)
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AA seq
342 aa
AA seq
DB search
MTTSEYCTQCPECSANLIQDYSKGEFICERCGYVAMDGVYDFGRESNATDFEEKSKNTRA
SGSTSLALHDYGLRTEIASGSKDYAGKSIDYQMAEQMNNIRKWHIRSRIVSPQERRLSNV
LTKINETCAAMSLPKLLVETAAMLYRNYENMQEAKGKSIACMAAATIYLACKKCRVVRSL
DEIVAATGVTEQDRSSVKLASKYYRMMVMEMSAFSEEASAAQETTTATPQQQQQAPVAMA
IDHYISKLSNMAKIDTKVERLAIDIAHKTNDRMLADGKAPNGLAAAYIYVSSILLGINIL
QRDVSSLSGVTEVTIRNRCKDMLTGFKLTVTVKPQARPNHLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgaccactagcgaatactgcacccagtgcccggaatgcagcgcaaacctcatccaggac
tattcaaagggcgagttcatctgcgagcgctgcgggtacgtcgcgatggacggcgtctac
gactttggccgcgagtcaaacgcgaccgactttgaggaaaaatccaaaaacacgagggcg
tctggctcgactagccttgcgcttcacgattacggcctgaggacagagattgcctctggc
tcgaaggactatgcgggcaaatcaatagactaccagatggccgagcagatgaacaacatc
cgcaagtggcacatacgcagcaggatagtgtcgccccaggagcgccgcctttcaaacgtc
ctgacaaagataaacgagacgtgcgcggcaatgtccctgccaaaactgcttgttgaaacc
gcggctatgctgtaccgcaactatgagaacatgcaggaggcaaaaggaaaatcaattgcg
tgcatggcggctgcgacaatctaccttgcgtgcaagaaatgccgcgtggtgcgctcgctc
gatgagatagtggcggcgacaggcgtcaccgagcaggacaggtcaagcgtgaaacttgca
tcgaaatactaccgcatgatggtgatggagatgagcgcgttctcggaagaggcgtcagca
gcgcaggaaacaacaacagcaacaccgcaacagcaacaacaggcgccggtcgcgatggcc
atcgaccactatatctcaaagctttcaaacatggccaagatagacaccaaggtagagcgc
ctcgcaatagacattgcgcacaagaccaacgaccgcatgcttgcagacggcaaggctcca
aacgggcttgcggcggcgtacatctatgtctcgtcgatactgcttggcataaacatactc
cagcgcgacgtgtcgagcctttcgggcgtgacggaagtgactatacgcaaccgctgcaag
gacatgctgaccgggttcaagctgacagtcacggtcaagccgcaggcaaggccaaaccac
cttgcctga
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