Nitrososphaera viennensis: NVIE_009290
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Entry
NVIE_009290 CDS
T03200
Name
(GenBank) putative cell surface uncharacterized protein related to type IV pili
KO
K21449
trimeric autotransporter adhesin
Organism
nvn
Nitrososphaera viennensis
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvn02000
]
NVIE_009290
Transporters [BR:
nvn02000
]
Other transporters
Pores ion channels [TC:
1
]
NVIE_009290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flg_new_2
DUF499
Y_Y_Y
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
AIC15154
UniProt:
A0A060HEQ7
LinkDB
All DBs
Position
782988..788102
Genome browser
AA seq
1704 aa
AA seq
DB search
MTNDDKRNNSHSRRNKGISPVLGTIIFVLVAVAAIGTISFIFVAQDNYNTAVKKSTELVG
NKGKEQISVAQLEEAKLQIANDGPATSRIIGLVSADDSTGNLSLEPLNLALPSAQKLDYT
MPVSTTGGGLGSGKMGLLTSLGNIFWVDSKPLQNKPLPDFAIAVAPDSLTVEQGKTGTAS
ITVSPLNSFSDTVFLSASGLPQAASYLIKPSSGNPPYASTLTVQVGSTTPVGVYTITITG
DDKNGRVHSATLTLQVNAASNQDFTIAVSTKTVTLQQGSSAATNSITVSPVNGYDRTVTL
ETSGFPAGVTYSYSPLSAKPSFTSTLTIGSAANTPTGTYVITVKGSDDTGKVHSDTFTLQ
ITAQPDFDLSVNPSSLNLQSGGSGSSVVSVTSLNGYSGQVSLSLSGLPNGATASFSKPSG
SPSFTSVLDINAGTANAGTYNLIVTGTGSGGGKTKSTQLTLTIQETSFDFSLALGSSSVN
IQQGGSSSNTVTISPINGYNKIVSLSVSGIPSGVSASFNPQSGVPAFTSTMSISASTSAT
PGSYPVTVQAQGQDGKTHSTTFTLKVQAKYKLTISVQTAGPSVAPTTFTSDTFSTGLDGW
SYWGDSGYALARDTGTGSPAPSAKISGDAFATVHGIQKVVDLSSWSKAGTLTLSFNYRAA
SDYAGSTVTNAFVRIYNANTDLILYEETLVAGGTQDTGWKSYSKDITCSVLSSSGSSTNK
IRVVLFLGDGWRANWNQKNWYDNIKLESSTSAATCGGTTSPAPGTYSYVEGESVQVTALP
NAGWKLSHWSLDGVSVGSQNPASVTMNKDYALVAVFAQGQSGSDFVVSASPSSLSIAKGS
SGLTTVAVNSINGYSTGVSLSLSGLPVGASYSFQPWSSNAPFTSTLTINAGTANPGTYTL
SVTGTGLADGKIRTTTISLTVTPQFDFSLSLNPSSGTVQQGGSVQTTVTTTLLSGTSTSV
SLSASGGPLGTSFTFSPASGNPTFASTLTINIPSNVATGTYQVTVAGSGGGVSRTATYQL
TISSQTAQPFNYALSVSPSSLSIAKGSSAQTTVSVDLLAGSSAQAVALSSTGQPSGVTVS
FNPSSGNPTFKSTMSISVSSAANAGTYTLTITGTSGALAKSTTLTLTIVNAADFALSATP
GTLIVHQGSAGSTTIKIDAVNGYSNTVSLSATGLPSGVTCAFSPSSGKPTFSSTLTLSAS
QSAATGTFTVTINGAGADGKTRTTTLTLTIPKQTTYPLAVAVKDQFNAPVKGITVTIDSS
SYTTDTSGQVTVQVLQGTHTIAVPSSYLQSSGTRYLFDKWSDGGVTANPRTVTVNSAVTF
TAIEKKQHYLTMQTSASSAGTVSPSSDWYDSGKQVAISASASSGYKFDTWSGSGSGSYSG
TANPATITVNAPITETASFQKVYTVSVKTLATYGGLSASPLSGLKVKIGTTTVQTDSSGM
AAFALPAGTYQVSIVDTSTTKSISSVDVRGFAFKWWDNLSTSNPRTISVNGPSTLVAYYP
ITWQQYTLNPNTYTAEVADPSKTDSLGNPVLRSVSLPYAKSASNWLLGWEWSMDVRTDSK
GAYFGAHDYAAWGYTKAFTTKWNSKLTPATHSYAVDKLAISYSGYLNVKGITSDSDQGLY
FRYRDTYNNKGDTSPSVDWTNTKSYNGVVGAARVFTPKQVIVGDLMVSTYQWARGSNFDM
RFSNGYGWTTNNMVATLYFTPTNP
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgatgataaacgcaataacagtcattctcgccgaaacaaagggatctcgcca
gtccttggcacaataatctttgtgcttgttgcagtggcagcaataggcacaatatccttc
atattcgtggcccaagacaattacaacaccgctgtaaagaagagcacggaattagttgga
aacaagggaaaggagcagatatctgtagcacagctggaagaagcaaaattacagatagca
aacgatggtcctgcaacatccagaatcatcggactggtgtcggcagacgattcaactggg
aacctcagtctggaacctctcaatctggctttaccctctgcacagaaactggactacacg
atgcctgtcagtactacaggaggaggccttggcagcggcaagatgggtctccttacatct
ttgggaaatatcttctgggtagactctaaaccgctgcagaacaaaccccttccagatttt
gcaatagccgttgcaccggattcgctgacagtagaacagggcaagactggtacagcgtcg
ataactgtgagtcccctgaatagcttttctgacactgtatttctatctgcatctggcctt
cctcaggccgcaagctatctaatcaagccgtcaagtggaaaccctccatacgcaagcact
ttgacggtgcaggtaggctcgactactccggtcggggtttacacaatcacaattacaggc
gatgacaagaatggcagagtgcattctgccaccttgactcttcaggtcaatgccgcgtct
aaccaagatttcaccatagctgtgtcaacaaagactgtaactttgcagcagggctcgtct
gctgcaacaaattcaattacagtgtcgccggtaaacggctatgacaggacggtaacgctg
gaaacatcaggctttcctgcaggggttacctacagctacagccctctcagtgcaaaaccg
tcgttcacaagtacgctgaccatcggttcagcagcaaacacaccgaccgggacgtacgta
atcacggtgaaaggaagcgacgacaccggcaaggtacattcagatacctttacactccaa
ataactgctcagccagacttcgatttatctgtcaacccgtcatcattgaatctgcagagc
ggaggttccggctcatccgtggtatctgtaacgtctctgaacggttactctgggcaggtc
agcctgtcgttatcaggactgccaaatggcgctactgcatcatttagcaagccttctgga
agtccatcttttacaagcgtcctcgacatcaacgcaggcactgcaaacgcgggaacatac
aacctcatagtgacaggtactggaagcggaggcggcaaaacaaaatccacccagctgacg
cttaccatccaagaaacatcgtttgacttttcgctggcgttgggttcgagcagcgtaaac
atccagcaaggcggaagcagctccaacactgttacgatatcaccaatcaacggctacaac
aagatcgtaagcctgtcagtgtctgggattccatccggcgtatctgcctctttcaatccc
caaagtggtgtccctgcattcacaagcacaatgtcaatatccgcatcaacatctgcgaca
ccaggctcgtaccctgtaacagtgcaggcgcagggacaggacgggaaaacacattcaaca
acctttacactgaaagtgcaggcaaaatacaagctaacgatatcagtccagacagccgga
ccgtccgtcgcaccaacgactttcacctcagacacattcagcacaggtctggacgggtgg
tcatactggggagacagcggttatgcactggccagagacacaggaactggtagccctgcc
ccctcggcaaagatcagcggagatgcgttcgctactgtgcacggcatacagaaggtggtt
gacctatcttcatggtcaaaggcaggaaccctcacgttatctttcaattacagggctgca
tcagattatgcgggcagcacggtaaccaatgcgtttgtccgcatatacaatgcaaacaca
gacctgatactttacgaggagacgcttgtagccggtggaacgcaggacaccggttggaaa
tcctacagcaaagacatcacctgcagcgtgctgtcatcgtctggaagcagcactaacaag
atcagggtcgtcctgtttctgggagacgggtggagggcaaactggaaccagaagaactgg
tatgacaacataaagctggaaagctcgacatcagctgcaacctgtggaggcacgaccagc
ccggctccgggaacatactcctacgtcgaaggagagagtgtgcaggtaactgctctaccc
aacgcaggatggaagttgtctcactggagccttgacggagtaagcgtcgggtcccagaac
cctgcttcggttaccatgaacaaggactatgcgctggttgccgtatttgcacagggtcag
tcaggcagcgattttgtggtctctgcaagcccctcttctttgagcattgcaaaaggctct
tcaggcttgacgactgttgcagtaaactcgataaacggctattctacaggggtgagcctg
agcttgtcaggtctccctgtaggggcatcctactcattccagccatggtcgtcaaatgct
ccgtttaccagtacactgacgataaatgccggtacagcaaaccccgggacatacacactt
tccgtcacaggaacaggtttggctgacggcaagatcagaacaaccaccatttctcttact
gtaacgcctcagtttgatttctcactgtcactgaatccgtcttctgggaccgtgcagcag
ggaggatcggttcaaacaaccgtaacaacaaccttgctgagtggtacatcaacttcagtg
agcctctctgcaagtggaggaccacttggaacatcgtttactttcagtcctgcatccgga
aatccaacatttgccagtactctgacaatcaatattccaagcaacgttgctactggcaca
taccaggtaactgttgcaggaagtggcggaggcgtctcaagaacagcaacgtaccagctg
acgataagctcacagacagcgcagccattcaactatgctctatccgtcagtccctcaagc
ctgtccattgccaaaggttcctctgcgcagacgacagtctctgtagacctgctcgcagga
tcctccgcgcaggccgtcgcgctgtcatcaaccggacagccttccggcgtcaccgtctct
ttcaacccatcgtcaggaaacccaacattcaaaagcaccatgagcataagcgtgtcctcc
gcagctaatgcaggtacttatactctgacaataaccgggacttccggtgccctggcaaaa
tccacaacgttaacactgacaatagtcaacgcagccgattttgcactgtctgcaactcct
ggtactctcatagtacatcaaggctcagctggttcaaccacaatcaagatcgatgcagta
aatggatacagcaacacggtgtcactgtcggccacaggtctgccttcaggcgttacctgt
gcattcagtccatcaagcggcaagccgactttttcaagtacgctaacactctccgcgtcc
cagtcagctgcgactggaacattcacagtaacgatcaacggtgcaggtgccgatggcaaa
acaaggaccacaactctgacgcttacaatacccaagcagacaacctatccgcttgcagta
gctgtcaaggaccagttcaacgcgccggtgaagggaatcaccgttacgatagactcctca
tcatacacaaccgatacaagtggtcaggtaacagtacaggtcttacaaggaacccacact
atagcagttccctcttcttacctccagtcgtcaggcacaaggtacttgtttgacaagtgg
agcgatggcggagtaacagcaaatccaaggaccgttacggttaactctgcagtgactttt
actgccattgagaagaagcagcattacctgacgatgcagacatctgcatcatcagctggt
actgtgtctccctccagtgattggtatgattctggcaaacaggtggcgatttcagcatcc
gcatcgtcaggctacaaattcgatacatggtcaggctccggttcaggctcgtattctgga
acagctaaccctgccacgataacggtaaatgcgcccatcacagaaacagcaagcttccag
aaggtatacaccgtcagcgtgaaaacgctggcaacctatggaggtctttcggcatcaccg
ttatctggcctgaaggtgaagatagggaccaccacagtccagacagattcaagtggcatg
gcagcttttgcgctccctgccggcacctatcaggtgagcattgttgatacatccacgaca
aagtcgataagcagcgttgatgtcagaggctttgcgttcaagtggtgggacaacctctcg
acttcaaatccaaggacgatcagtgtgaacggaccctcaacactggtggcgtactaccca
atcacttggcagcagtacacattgaatccaaatacgtacactgcagaggttgctgacccc
tcgaaaaccgactcccttggaaaccctgtcctgaggtcggtatctctgccgtatgcaaag
tctgccagcaactggcttcttgggtgggagtggagcatggatgtgaggacggacagcaag
ggagcatacttcggcgctcatgattatgccgcatgggggtacaccaaggcctttacaaca
aagtggaactcaaagctgacacctgcaactcattcgtatgcggtagacaaactggcgata
agctattccggctacttgaatgtgaaaggcataacctcggattcagaccaggggctttac
ttcaggtacagggacacttacaacaacaagggagacacaagcccgtctgttgactggaca
aatacaaaatcgtacaacggggtggttggcgcggccagagtgtttactccaaagcaggtg
atagtaggagacttgatggtatcaacataccagtgggccagaggctccaactttgacatg
aggttcagcaacgggtatgggtggactacaaacaacatggtcgccacgctttactttacg
ccgacaaatccgtag
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