Nitrososphaera viennensis: NVIE_009780
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Entry
NVIE_009780 CDS
T03200
Name
(GenBank) putative transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nvn
Nitrososphaera viennensis
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvn03000
]
NVIE_009780
Transcription factors [BR:
nvn03000
]
Prokaryotic type
Helix-turn-helix
Other families
NVIE_009780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
MarR
PLDc_2
HTH_Crp_2
HTH_IclR
HTH_7
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
AIC15206
UniProt:
A0A060HNR4
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Position
826728..828479
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AA seq
583 aa
AA seq
DB search
MPASTRTHIQICVYGYSYKPCKTRIATREYTGVSLENITKRFVDLGLSEEEATVLRDLYL
AGESKAGDLARSSGLARIKVYRILDRLQGMNIVESTMGRPVIFSPIPPDSAIERLIEHAA
RKLETMQVAREEVIKELSRFKLQERPQVEAKYRIIQGKRQIYPWIAKMAASAGSEILAYV
EREDLRKIYYTDIPEELAKARKRGVKVRILTDVDYSLAATVKDYAGYADIRHTRIPGMSI
LLVIDESELVVSATTKVEGATDVALWMNGKNFVAGIKGLLGESWENAISAQTRINIMKEG
GKALQDILIVRGTQSIGEFYKGMLSRAKKKVLHISVPYDTEFFGTLASDSLAWAGRKVEM
QVLTAIDGSSLGDIRDLGERCKIRHVDARAGVNITIVDGEEVMLTPAAGGAKSRSQSAIW
SNVRDYVEHYRIMFDNLWSSSTAMPDRIVLVEAQAKVAEMASSMRRLLEGAGFRIQKAIK
GTSGFVHEFSIVAAREHGTAVVVVDIAGPEKPDLQAAVIGFVVKCMDIKADSKLLVTLSD
PAEMQASIKSFHSGITVAGAGDAEKALRKMIGVQEKQQQITTA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcgtccacgcgcacacacatacagatatgtgtatacggatattcatacaaacct
tgtaaaacgcgaatagccacccgggaatacaccggcgtgtcgcttgaaaacattaccaag
agatttgtagatctcgggctctcggaagaagaggccacggtcctcagagacctgtacctg
gcaggcgaatccaaggccggggaccttgcaaggtcgtctgggcttgccagaatcaaggta
tacaggatacttgacaggctgcaaggaatgaacatagtagagtccaccatgggcaggccg
gtcattttttccccaatccctcccgacagcgcaattgagaggctgatagagcacgcggcc
aggaaacttgagacgatgcaggtcgcgcgcgaggaagtgataaaggagctttccaggttc
aagctgcaggaaaggccgcaggttgaagccaagtacaggattatccagggcaagcggcag
atctacccgtggatagccaagatggccgcctctgcaggttctgaaatccttgcatatgtc
gaaagggaggatttgagaaagatctactacactgacatccctgaagagcttgcaaaagca
agaaagaggggcgtaaaggtcaggatactgacggacgtggactattcgcttgcggcaact
gtcaaggactatgcagggtacgcggacatcaggcacaccaggatccccgggatgagcatc
ctgctcgtcatcgatgaatcagaacttgtcgtgtcggccacgacaaaggtagaaggagcc
accgacgtggctttgtggatgaacggcaagaactttgtggcaggaataaagggtctcctc
ggcgaaagctgggagaacgccatcagcgcccagacaaggataaacatcatgaaggaaggc
ggcaaggccctccaggacatcctcatagtcaggggcacgcagtcgataggcgagttctac
aaaggcatgctttcaagggccaaaaagaaggtgctgcatatctctgtcccgtacgacacc
gagtttttcgggacacttgcgagcgactcgcttgcgtgggctggcaggaaggtggagatg
caggtcctgactgcgatcgacggatcatcgcttggcgacataagagaccttggcgaaagg
tgcaagatccggcacgtagatgcaagggcaggagtcaacatcacaattgtggacggagag
gaggtcatgctcacgccagcagccggaggggcaaagagccgcagccagagcgcgatatgg
tcaaacgtacgcgactatgtcgagcactacaggatcatgtttgacaacctctggtcttcg
tcgactgcaatgcctgacagaatagtgcttgtcgaggcgcaggcaaaggttgcagagatg
gcatcgtcaatgcgccggctgcttgaaggcgcaggatttaggatccaaaaggcgataaag
ggcacgagcggctttgtgcacgagttttccatcgtggccgcaagagagcacggcacggct
gtcgtcgtggtcgacatagccggccctgaaaaacccgacctgcaggcggcagtgataggg
ttcgtcgtcaagtgcatggacataaaggctgacagcaaactcctagtcacgctttcagac
cctgcagaaatgcaggcttcgataaagtccttccatagcggcatcacggtcgcaggcgca
ggcgacgctgaaaaggcgctcagaaagatgataggggtacaagagaagcaacaacagatt
accacggcctag
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