Nitrososphaera viennensis: NVIE_009920
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Entry
NVIE_009920 CDS
T03200
Symbol
trmB1
Name
(GenBank) putative transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nvn
Nitrososphaera viennensis
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvn03000
]
NVIE_009920 (trmB1)
Transcription factors [BR:
nvn03000
]
Prokaryotic type
Helix-turn-helix
Other families
NVIE_009920 (trmB1)
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Paralog
GFIT
Motif
Pfam:
TrmB
HTH_65
MarR_2
HTH_IclR
TrmB_EBD_N
DUF7436
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AIC15219
UniProt:
A0A060HEX6
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Position
complement(840333..841340)
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AA seq
335 aa
AA seq
DB search
MTNKIRYVPNLGVCSYSTYKVLNNFFLDWLSIMASSIKKVYDVDLDFSEIEDGSIYGRNK
IDYAFAKYFLAVQKKLLPDLQKLDLSLNEARILLFLMIRKHSTATDVSKYTGIGRTETYH
YLSNLLSKGVVLSTFDRPQKYYALPYTEAVDCLVRAKQNALRAVSENKDEHQSMINSIVE
GMVMPEQDGKESYQVIVGEDPVHAKIARMLSAAKAEASVLLSDRYMVDLYYSEMTDALFG
LAEKGVKVRLHTSCSKMSKFINEEGAEADMRAVGLKVVDGASTPVDFVIVDDQEMIILLN
SRPAPSKKQESCGFYTNNQSLIAAFKFMFNKTGGA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaaatacgctatgtgccgaatttaggtgtatgtagctattctacttacaaa
gtattaaataatttttttctagattggctttctataatggcttcatcaatcaaaaaggtc
tacgatgtcgatctcgatttctctgaaatcgaggacggctcaatctatgggcgcaacaag
attgactacgcgtttgccaagtatttccttgccgtccagaagaagctcttgcctgacttg
caaaagctggatctcagcctgaatgaagcgaggatcctgctctttcttatgatccgcaag
cactccactgcgaccgacgtgtccaagtacactggaataggccgcacggaaacataccac
tacctttcaaaccttctttcaaagggagtcgtcctttccacgtttgacaggccgcagaaa
tactatgcgctgccgtacaccgaggccgttgactgcctggtcagggcgaagcagaatgcc
ctgcgcgccgtgtcggaaaacaaagacgagcaccagagcatgataaacagcatagtcgag
ggcatggtgatgcccgagcaggacggcaaggaaagctaccaggtcatagtcggcgaagat
ccagtgcacgccaagatagcccggatgctgtctgcggcaaaagccgaggcttccgtgctc
ctttctgacaggtacatggtggacctttattattctgaaatgaccgacgccctgttcggc
ctggcggaaaagggcgtaaaagtgaggctccacacgtcgtgctccaagatgtcgaaattc
ataaacgaggagggggcagaagccgacatgagggcagtgggcctgaaggttgtcgacggc
gcaagcacgcctgtagactttgtcatagtcgacgaccaggaaatgataatcctgctgaac
agccgcccggcgccaagcaagaagcaagagtcttgcggcttttacaccaacaaccagtca
ctgatagcggccttcaagttcatgttcaacaagacgggtggcgcttga
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