Nitrososphaera viennensis: NVIE_010490
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Entry
NVIE_010490 CDS
T03200
Name
(GenBank) putative phosphoesterase, DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn03410
Base excision repair
nvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NVIE_010490
03430 Mismatch repair
NVIE_010490
03440 Homologous recombination
NVIE_010490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvn03400
]
NVIE_010490
DNA repair and recombination proteins [BR:
nvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NVIE_010490
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NVIE_010490
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NVIE_010490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AIC15275
UniProt:
A0A060HIY7
LinkDB
All DBs
Position
complement(888212..889411)
Genome browser
AA seq
399 aa
AA seq
DB search
MNRIVQSNRFLLVDSHRHRCHGRTIAVPEHAKNARKPISCSRMFLFPVHGGRVFFSLFLK
LLIPASYGYALLPEIVVMSHKEDVDGLASAALAKAAFDAQTVILSDYPALIPKLEKLASS
EKKIDSLFICDLGLSKKNEQRFVELLAKIAGKGTKVTYIDHHDISKETVAGLKKAKVTLI
HTVKECTSVQVYRKYKKKLPESATFLAAMGALTDYMEKKPAAAKLVPRYDRQFLMLEATS
LSYMISASQKDEDFLVRIVDTLSKGKYPHDVKGGFELAEKYAKKVANAVESIRSGIVKLD
NLAHAPSTVELSSSMVVNFVLGSSGKPAAMVYKLKEDIGSYVVSIRGSKGCKVHLGRLVN
DIASNLGGSGGGHDKACGAVIPKDRLNEFVKTLDSKIVG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccggattgttcaaagcaaccggtttttgttggtggatagccatcggcaccgttgc
catggacgcaccattgcagtcccggaacacgcaaagaacgcgcgtaagcccatttcgtgc
agtcgtatgtttctgtttcctgtgcatggcggtcgcgttttcttctctctttttctcaaa
ctattaatcccggccagttacggctatgctctgttgcctgaaatcgtagtcatgtcgcac
aaggaggacgtcgacggcctcgcttccgcagcgcttgccaaggccgcgtttgacgcccag
accgtcatactttctgattaccctgcgctgatacccaagctggaaaagcttgccagctct
gaaaaaaagatcgacagcctgttcatctgcgacctaggattgtcaaaaaagaacgagcag
aggtttgtcgaactgcttgcaaaaatcgccggcaagggcacaaaggtgacctacattgac
caccacgacatcagcaaggaaactgtcgcgggcctgaaaaaggccaaggtaacgctcatt
cacacggtcaaggaatgcacaagcgtgcaggtgtaccgcaagtacaagaaaaagctgcca
gaaagcgcgacgttccttgcggcaatgggtgcgctcaccgactatatggagaaaaagccc
gccgcggcaaaactcgttccgcgttacgacaggcagttcctcatgcttgaagcaacatcg
ctttcgtacatgatctctgcaagccagaaggacgaagactttctcgtgagaatagttgac
accctgtcaaagggcaagtacccgcacgacgtcaagggcggctttgagctggcagaaaag
tacgccaaaaaggtggcaaacgcggtagagtcgatacgctccggcatcgtaaaactggac
aatctggcgcatgcgccaagcacagtagagctgtcgtcaagcatggtggtcaactttgtc
cttggctcgtcgggcaagcctgcggccatggtctacaagctaaaggaagacatcggctcg
tacgtggtttccatacgcgggtcgaagggctgcaaggtacaccttggccggctcgtaaac
gacattgcgagcaacctcggcgggagcggcgggggccacgacaaggcctgcggcgcagtc
ataccaaaggacaggctgaacgaattcgtcaagacgcttgattcaaagatagtaggatag
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