Nitrososphaera viennensis: NVIE_013670
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Entry
NVIE_013670 CDS
T03200
Symbol
rfcL
Name
(GenBank) replication factor C large subunit
KO
K04800
replication factor C large subunit
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NVIE_013670 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvn03032
]
NVIE_013670 (rfcL)
DNA replication proteins [BR:
nvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
NVIE_013670 (rfcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_14
AAA_16
AAA_5
AAA_22
Rad17
AAA_7
RuvB_N
AAA_33
AAA_25
AAA_28
ABC_tran
nSTAND3
AAA_17
AAA_18
TIP49
NACHT
DUF815
Mg_chelatase
AAA_8
IstB_IS21
bpMoxR
AAA_30
NTPase_1
RNA_helicase
RsgA_GTPase
AAA_19
AAA_3
AAA_29
TsaE
NPHP3_N
Sigma54_activ_2
Zeta_toxin
AAA_11
NB-ARC
DUF5906
MMR_HSR1
SRP54
SKI
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIC15606
UniProt:
A0A060HPX5
LinkDB
All DBs
Position
1162586..1163839
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AA seq
417 aa
AA seq
DB search
MWSEVHRPQRVEQMVGNEDARIAVVKWLSGWVSGTKPLLLVGPPGVGKTTIVHALARQFD
YDLVEMNASDVRNRDSIEARIKPVFANTGLFGRKILLFLDEVDGISGREDSGGLDALVDL
IKEPTVPVIMAANEKSAKIKELAKGCKVVEFAPVPPRLLLMFLDHVLAKEKAKLGPGDKV
SIVVNSGGDIRSLLNSAQSRAAGYATVSNRDVTEIDIADAINGYFAAKDRAAAMQALARA
DASFPDPRYEGMSPETRRKDMVATLFSSIVSSHAAADKESLAELLDVLSRADMVVGRVSR
NRQWSLLRYVRDMLAGGLYVKSRGKDIKYNQYTMPWPVMGPIFARSQTIRKIASAVGPAM
NVSRSTASSVVLPYLVRAIIDEKVDVSEFAVTNFGDESIGESLGKEVERAKGARKKQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctgaagtgcacaggccccagagggtggagcagatggttggaaacgaggacgca
aggatagcggtggtcaagtggctttcaggatgggtcagcggcacaaagccgctgctcctc
gtgggcccgccgggcgtcggcaagacgacaatcgtgcacgcccttgcgcgccagttcgac
tatgacctggtagagatgaacgcaagcgacgtgagaaaccgcgacagcatcgaggcaagg
ataaagccggtgtttgcaaacaccggactctttggccgcaagatattgctgttccttgac
gaggtggacggcatctcgggcagggaggactcgggcgggcttgacgcgcttgtcgacctg
ataaaagagcccaccgtcccggtgataatggccgcaaacgaaaagtcggcaaagataaag
gagctcgccaagggctgcaaggtagtcgagtttgcgcccgtcccgccgaggcttctcctc
atgttcctcgaccatgtgcttgcaaaggaaaaggccaagcttggccctggcgacaaggtg
tcgatcgtggtgaacagcggaggagacatcaggtcgctcctcaacagcgcccagtcgcgc
gcggccggatacgcgacggtgtcaaacagggacgtgacagagatagacattgcagacgcg
ataaacggctattttgcagccaaggacagggcggctgcaatgcaggcccttgcaagggcg
gacgcctcgtttcccgacccccggtacgagggcatgtcgccggagacaaggcgcaaggac
atggttgccacgctgttttcatccatcgtctcctcccacgctgcggcggacaaagagtcg
cttgcggaactgctcgacgtcctgtcaagggccgacatggtggtgggcagggtcagcagg
aaccggcagtggagcctcttgcgctatgtaagggacatgcttgccggcggcctgtacgta
aagtccaggggcaaggacatcaagtataatcagtatacgatgccgtggccggtgatgggc
cccatatttgcaaggtcgcagacgataaggaaaatcgcgtccgcagtagggccggccatg
aacgtgtcgaggagcactgccagctcggtcgtgctgccgtacctggttcgcgccatcatt
gacgaaaaggtggacgtttctgaatttgcagtcacgaactttggtgacgagtcgataggc
gagtcgctcgggaaggaagtcgagcgggcaaagggggccaggaaaaaacaatga
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