Nitrososphaera viennensis: NVIE_013850
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Entry
NVIE_013850 CDS
T03200
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nvn
Nitrososphaera viennensis
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvn03016
]
NVIE_013850 (truB)
Enzymes [BR:
nvn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NVIE_013850 (truB)
Transfer RNA biogenesis [BR:
nvn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NVIE_013850 (truB)
Prokaryotic type
NVIE_013850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AIC15624
UniProt:
A0A060HG65
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All DBs
Position
complement(1176577..1177632)
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AA seq
351 aa
AA seq
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MFPQLENLVNVDEDVTDERYGHYPDRRPISELLYYGLILADKPAGPTSHEVVAWVKRILE
IEKAGHSGTLDPGATGLLPIGLGEGTKALGVLLLGPKEYYALARLHAHAPADKIRRVMQE
FTGEIYQRPPQRSSVKRVTRVRTVYAFDYIEDYDRLILMRVLCQAGTYIRKIIYDIGEVL
SPGATMVELRRTQVSNLYEKDGLVRLHDLADAYQRYKETGDEEKLRRLIRPIEHCLEGIR
GITVRDTAVDALCHGAPLAVPGVIAVPKDLRAGELVGVYTLKGEIVGLAEAAMTKEQIEE
SARGVAFVMKRLIMRPDTYPKAWRSRGEHAAAPDVAVRPEVDLGKLESDDV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgttccctcaactagaaaacctcgtcaacgtggacgaggacgtgacagacgagcgctac
ggccactaccccgacaggaggccgataagcgagctattgtattatggcctgatactggcg
gacaagcccgcgggcccgaccagccacgaggtcgtggcgtgggtaaagaggatactggag
atagaaaaggccggccactcggggacgcttgaccctggagcgaccgggcttttgccgatc
ggccttggcgaagggacaaaagcccttggcgtgctcttgctcgggccaaaggaatactac
gcccttgcgcgcctgcacgcgcacgcgccggcagacaagataaggcgggtaatgcaagaa
ttcacgggcgagatataccagcggccgccgcagcgctcttctgtaaagagggtcacccgc
gtccgcaccgtgtacgcgtttgactacatcgaggattacgaccggctgatactgatgcgc
gtgctctgccaggccggcacgtacatccgcaagataatctatgacattggcgaggtcctg
tcgccgggcgcaacgatggtggagctgcgccgcacgcaggtgagcaacctgtatgaaaag
gacggcctcgtgcgcctgcacgaccttgctgacgcgtaccagcgctacaaggaaaccggc
gacgaggaaaagctgcgccggctcatccggccgatagagcactgccttgaaggaatccgc
ggcataaccgtgcgcgatacggcggtggacgcgctgtgccacggcgctcctcttgccgtg
cccggggtaatcgcggtgccaaaggacctgcgcgcaggcgagcttgtcggtgtctacact
ctcaagggcgagatagtcggccttgcagaggctgcaatgacaaaagagcagatagaggaa
agcgcaaggggagtcgcgtttgtcatgaagcgcctgataatgaggccggacacctacccc
aaggcgtggcgctcaaggggcgagcacgccgcagccccggatgtagccgtacgcccggaa
gtggacctgggcaagctggaaagcgacgatgtctag
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