Nitrososphaera viennensis: NVIE_016160
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Entry
NVIE_016160 CDS
T03200
Name
(GenBank) peptide/opine/nickel ABC uptake transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nvn
Nitrososphaera viennensis
Pathway
nvn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NVIE_016160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvn02000
]
NVIE_016160
Transporters [BR:
nvn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NVIE_016160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Gmad2
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
AIC15868
UniProt:
A0A060HK31
LinkDB
All DBs
Position
1379789..1382926
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AA seq
1045 aa
AA seq
DB search
MKDILEIQGVISVNKAPLLSLSIILVLLLPVFSTVFNTASAQQQQTEKKGPYVDQVTFIH
RDDENLALEEVKSGNLDAYYFHIPLEAAADAKSDPRVTVYDRTAGSAGLLMNPAPARDGN
SLNPFSIKEVRFAMNYLIDRQFVVNEIYKGYGSPLVDPFGIYSPEYLNVIDTVESFGFSY
NPGLAEKMITDAMTAAGATKDAASGNKWMFKESPVTVKIMIRLDDASRKSIGELVASKLE
ESGFTVQKEYGDLTKANTIVYGSNPQDLKWNVYTEGLAGTSVFVKYNPIIPGQMYAPWVG
NMPGSQNPSFWNYQNSTLDEITQKIFFANFTSAEDRSRLVNAAVKGGIQESVRIFLAQRT
EPFVVSSSLKGVVNDFGAGITSKYSLVNARPSDGKGTLNIGVKQIHQGSWNGIGGLSDTY
SRDIFNNVYDSATFRDPYTGEIIPMRTQWTDISTQGPTGKLQVAEDAQTWDPATQKWKDA
GPDATATSKVTYKLLYSKWHNGIPMDKSDLLYSQYFTFEWGTNSGSDDQTVDPEYTSSAA
PALPLLKGIKFTSDGTLESYVNFWHYDDKEIADFAPAWAAEPWEITAATERLVTDGKFAY
SRSQASAKNVDWLDPIVPEHAQAIKEELQQMKSENYVPAALKGIVSVDDAKKRYDASIAW
INTHGNAIISNGAFYLDSFNIAGGTITIRAFRDPSYPFEQGHWSAYENPKLATIERVDAA
RMIEIGKPAEMTVSVQVDGKPSNDALVEYFIFNKDGKVVARGEAKAAQDGSAAGTFRVDL
TPENTSKLTPGPSQLKIFANSKYAFRPDISTNTILAVAAGAPGGSNSGGVSTTTPGSNGG
QQQQQPQQPAQPSGCLIATAAFGSELTPQVQYLRNFREHYILSTASGAAFMNAFNTVYYS
FSPQVADYERQQPWLQATVKTALYPLFGILMASEKAYSVAAGGDAGAVAAGAVASTLIGA
VYLWPAALSARLQGRFGIAAKVSLAVMGAAAALIAIGVATTDNSPLLLLAGTSLFVLSAA
SASAIAVGKLARIGYTALIRQAGRH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatattggagatccaaggggtaatctcagtgaataaagcacccctgctgtct
ctgtcgataattcttgtactgcttttgcccgttttttccacagttttcaataccgcgtct
gcccagcaacagcagacggaaaagaagggtccgtacgtggatcaggtgacgtttatccac
cgcgacgacgagaacctcgcccttgaggaggtcaagtcgggaaaccttgacgcctattat
ttccatattccgcttgaagcggcggccgacgcaaagagcgacccccgcgtgactgtatac
gacaggactgccggctctgccgggctcttgatgaaccccgcgccggccagggacggaaat
tccctcaacccgttctccataaaggaagtcaggtttgccatgaactacctcattgaccgc
cagttcgtggtgaacgagatctacaaggggtacggaagcccgcttgtcgacccctttggc
atctactcgccggaatacctcaacgtcattgacacggtagagtcgttcgggttcagctac
aaccccggccttgcagaaaaaatgatcaccgacgccatgactgccgccggcgccaccaag
gatgcggcaagcggcaacaagtggatgttcaaggaaagccccgtcaccgtcaagataatg
ataaggctcgacgacgcatcgagaaaatcgataggagagcttgtcgcctcaaagctcgaa
gagtcagggtttacggtgcaaaaggaatatggagacctgaccaaggccaacaccatagta
tacggctccaacccgcaggacctgaaatggaacgtgtacacggaggggcttgcaggaacg
tctgtgttcgtgaaatacaacccgataataccgggccagatgtacgccccgtgggtcggc
aacatgccgggctcccagaacccgagcttctggaactaccagaactccacgcttgacgag
attacgcaaaagatattctttgccaactttacgtcggcagaagacaggagcaggctggtg
aacgcggccgtcaagggtggcatacaggaatcggtcaggatattccttgcgcagaggaca
gagccgtttgtggtttcttcttcgctcaagggcgtggtcaacgactttggcgcaggcatc
acaagcaagtattcgctcgtaaacgcccggccttcagacggcaagggcaccctcaacatc
ggcgtcaagcagatccatcaagggtcatggaatggcataggcggcctgtcagacacgtac
agcagggacatctttaacaatgtctacgacagcgctactttcagggacccgtacaccggc
gagataatccccatgaggacccagtggacagacatctccacgcagggcccgaccggcaag
ctgcaagtggcagaggacgcccagacgtgggatcccgccacgcaaaagtggaaggacgcc
gggcccgatgccactgccacgagcaaggtcacgtacaagcttctctattcaaagtggcac
aacggcatcccgatggacaagtctgacctgctgtactcccagtactttacttttgagtgg
ggcaccaattctggaagcgacgaccagacggtcgacccagaatacacctcgtcggccgcg
ccggcactcccgctcctcaagggaatcaagtttacgtcggatggcaccctagagtcgtac
gtcaacttttggcactatgacgacaaagagatagctgactttgcgccggcgtgggcggca
gagccctgggagataaccgcggcgactgagaggctcgtcaccgacggcaagtttgcatat
tcaaggagccaggcaagcgccaagaacgtcgactggctcgacccgatagtgccggagcac
gcgcaggcgataaaggaagagctgcaacagatgaagagcgaaaattacgtacctgcggcg
ctcaaggggatagtgagcgttgacgacgcgaaaaagcgctacgacgcaagcatcgcctgg
ataaacacgcacgggaacgccatcatcagcaatggcgcgttctaccttgacagtttcaac
attgccggaggaacgataaccatcagggctttccgcgacccttcgtacccgtttgagcag
gggcactggtcggcctacgagaacccgaagcttgcgacgatagaaagggtggacgcggcc
aggatgatagagataggcaagccggcggaaatgactgtcagcgtgcaggtagacggcaag
ccgagcaacgacgcgctggtagaatatttcatattcaacaaggacggaaaagttgttgca
aggggcgaggccaaggcagcgcaggacgggagcgcagcagggacgttcagggttgacctg
acgccggagaacacgtcgaaactgacgccggggccaagccagctaaagatatttgcaaac
agcaagtacgctttcaggccggacatttcgaccaacaccatccttgccgtggctgcagga
gcgccaggcggcagcaatagtggaggagtaagcacgacaactcccggcagcaacggaggg
caacagcagcaacaaccacagcagccggcgcagccgtccgggtgcctcatcgcaacagcg
gcgtttggctccgaactgacgccacaggtgcagtacctccgcaactttagagaacattac
atactgtcaaccgcctccggcgcggcgttcatgaacgcctttaacacggtctattactcg
ttcagcccgcaggtcgcggattacgagcgccagcagccgtggctgcaggccacggtcaag
accgccctgtacccgctgttcgggatactgatggcgtcagaaaaggcgtactcggtggcc
gcaggaggcgacgcaggggcggtggcggcaggagccgttgcaagcacgctgattggcgct
gtatacctgtggccggcggcgctttcggcgcgcctgcagggcaggtttggaattgctgcc
aaggtatcgcttgcagtgatgggtgccgcagcagcgttgattgcaataggcgtggcaacg
acagacaattcgccgttgctgctgttagcaggcacgtccctgtttgtcctgtcggcggca
agcgcgtccgcgattgcagtcggcaagctggcaaggatcggctacaccgcgctaatacgg
caggcaggcagacattaa
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