Nitrososphaera viennensis: NVIE_0359
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Entry
NVIE_0359 CDS
T03200
Symbol
endA1
Name
(GenBank) putative tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nvn
Nitrososphaera viennensis
Brite
KEGG Orthology (KO) [BR:
nvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvn03016
]
NVIE_0359 (endA1)
Enzymes [BR:
nvn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NVIE_0359 (endA1)
Transfer RNA biogenesis [BR:
nvn03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NVIE_0359 (endA1)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AIC14546
UniProt:
A0A060HLT4
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All DBs
Position
307134..307760
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AA seq
208 aa
AA seq
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MSSSPPTSPAPFPERQQQTASAEEAQPAVVEARLAGGGKVLIDETRSQDELRTRGFGERE
GQEYVLKPYEALYLLQAKRLVFASKKDVTFDSLFEHLLKHDRNIMTKFLVYRDLRSRGYV
AKEGFGFGDDFRVYERGEYEKKPAKYVVFGINEGANVTARSFASAIEQIEKMGKEAVVAV
IERRGEVIYYKASKMRFSQNKHDTFLVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcccctcctacctctcctgcaccgttcccggaaaggcagcagcagacggca
tcggcagaggaggcgcagcctgcggtggtggaggcaaggcttgccggcgggggcaaggtg
ctgatagacgaaacaaggtcgcaggacgagcttcgcacccgaggctttggcgagcgtgaa
gggcaggaatacgtgctaaagccgtacgaggcgctgtacctcttgcaggcaaagcgactt
gtgttcgccagcaaaaaagacgtcacttttgattcactctttgaacatttgctaaagcac
gaccggaacatcatgaccaagttcctcgtctaccgcgaccttaggagccggggctacgtc
gcaaaagagggctttggctttggcgatgatttccgcgtctatgaaagaggcgagtatgaa
aaaaagcctgccaagtacgtggtctttgggataaacgaaggcgcaaacgtgactgcaagg
agctttgcgagcgccatcgagcagattgaaaagatgggcaaggaggcggtggtggcagtt
attgaaaggcgcggcgaggtaatctactacaaggcatccaagatgcgcttctcgcagaac
aagcacgacacttttctagtccggtga
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