KEGG   Natrinema versiforme: FEJ81_00140
Entry
FEJ81_00140       CDS       T05974                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
nvr  Natrinema versiforme
Pathway
nvr03030  DNA replication
Brite
KEGG Orthology (KO) [BR:nvr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FEJ81_00140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nvr03032]
    FEJ81_00140
DNA replication proteins [BR:nvr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     FEJ81_00140
SSDB
Motif
Pfam: Rep_fac_C Intein_splicing LAGLIDADG_3 AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_assoc_2 RCF1-5-like_lid Rad17 DNAX_ATPase_lid AAA_22 HTH_28 AAA_14 Terminase_5 DUF433 HTH_23 GerE
Other DBs
NCBI-ProteinID: QCS40828
UniProt: A0A4V6MBE8
LinkDB
Position
28519..31611
AA seq 1030 aa
MSEADAEAAEPTPGKTEVWIEKYRPERLDEIKGHENIVPRLQNYVEQDDLPHLMFAGPAG
TGKCVTGETPVLTNKGVAPISTVVGDVDGFGTPDDDLEILTYDNDGSFEYVSPSHVFSKE
ATNLVSITTRDGNEFTVTPEHKLLVADETGLEWREAGSLSGDERIVRPLETPLAPDDTSA
SLDWLSSMDGDRTFVTVSESFAERYEIPAEENYVGQKKTVIGCLRRGYSVAEIATEYEIT
RKTAQNYARDVSIDLEEPSATCSLAYLRSLDVAESELRSNVEAVQYVTPYNKRSGPITPP
WELTPDLARFVGLAISEARIENGRIKFYNTDEALRESFERIAQELFDLETTRGIQKDVPY
VELRTKSLHHFLESCFDVFGESSESGIGSTLVHAPDDARAAFLQAVFDSEAYVAEQGTIE
LTQKDESLITLCSYLLASFGIPTRRKRVEKAATNGSGSKTEYHQLYVSGVSALSRFEDAV
GFTLSHKRDRLADATTGSGNPNYDTMPAQTSVDDLCRTLALKKEPLVRETLNPDNPGREA
YLEDVDSVLEAASDRLEAAQQVKQEIEQVRSDLRSLSAVPTEWISQRDALEPIEARKEVE
ASTDIRTDRLLEYADGRRSPTASRTGELLVTLDSRTETPETDSVQESLRNAIDALGVSDN
RIAEETELLGSDVRALVENDDHDLASLPRFETVADRVLDVADEMCSMAVVEQLVTLDRLS
RETLYFDRVTDIERIQDEQRVYDLTVPGTRNYVAGDVPTVMHNTTAAQAIAREVYDDDWR
ENFLELNASDQRGIDVVRDRIKDFARSSFGGYDHRIIFLDEADALTSDAQSALRRTMEQF
SNNTRFILSCNYSSQIIDPIQSRCAVFRFTELSGKAIEAQVREIAATEDIEVTDDGVDAL
VYAADGDMRKAINALQAAAVMGETVDEETVFAITATARPEEVEAMVDHAIDGDFTAARAA
LEDLLTERGLAGGDVIDQLHRSAWEFDIPEQATVRLLERLGEVDFRITEGANERLQLEAM
LASLALDDDN
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgagcgaggccgacgccgaggcggcggagcccacacccgggaagaccgaagtctggatc
gagaagtaccgaccggagcgcctcgacgagatcaagggccacgagaacatcgttccgcgc
ctgcaaaactacgtcgagcaggacgacctcccgcatctcatgttcgcggggccggcgggc
acggggaagtgtgtcaccggcgagacaccggtgctgacgaacaaaggtgtcgctccgatc
tccactgtcgtcggtgatgtcgacggattcggaacgccggacgacgacctcgagattctg
acgtacgacaacgacggttcgttcgaatacgtctccccatctcacgtcttctcgaaggaa
gcgaccaatctcgtctcgattacaacgcgagacggaaacgagttcacggtcacgccggaa
cacaaacttctcgtggccgacgagacaggcctcgagtggcgggaagccggatcgctgtcc
ggcgatgagcggatcgtccggccactggaaacgccactcgctcctgacgacacatccgca
tcgctcgactggctctcgtcgatggatggcgacagaacgttcgtcaccgtctcggaatcg
ttcgccgagcgatacgaaatcccagccgaagagaattacgtcggacagaagaagacagta
attggctgtcttcgacgaggctattcggtcgccgagatcgccaccgaatacgagatcact
cgtaagacggcgcagaattacgcacgagacgtctcgatcgatctcgaggagccgtcggca
acctgttcgcttgcgtacctccgatcgctcgatgttgcagaatccgagcttcgatccaac
gtagaggccgtacagtacgtcacgccgtacaacaaacgatccggtccgatcacgccgccg
tgggaactcacgccggatctggcgcggttcgtcgggctggcgatcagcgaagcacgtatc
gagaacggccgtatcaaattctacaatacggacgaggctctccgtgagtcgttcgaacgc
atcgcacaggaactgttcgacctcgagacgacccggggcatacagaaagacgtcccgtac
gtcgaactgcggaccaagtcgcttcaccacttcctcgaatcttgtttcgacgtcttcggt
gagtcgtcggaatcggggatcggctcgacactcgttcacgctcctgacgacgctcgggca
gcgttcttgcaggccgtcttcgattcggaagcgtacgtcgcggagcagggaacgatcgaa
ctgacacagaaagacgaatcgctgatcacgctctgttcgtacctgctcgcttcgtttggg
attccgacgcggcgaaagcgcgtcgagaaggcggcgacgaacggttcaggatcgaaaacg
gagtaccaccagttgtacgtttccggagtttcggcgctctcgcgtttcgaagatgcagtc
ggattcacgctctctcataaacgggaccggctcgctgacgcgacgaccggttccgggaat
ccgaattacgacacgatgcccgcacagacgtccgtcgacgacctctgtcgaacgctcgca
ctgaaaaaggagccgttggtgagggagacgctgaatcctgataaccccggtcgtgaggcc
tatctcgaggatgtcgacagcgtgcttgaggctgcgtcggaccgtctcgaggccgcccaa
caggtcaagcaggaaatcgaacaggttcgatccgaccttcgttcgttgagtgccgttcca
actgaatggatcagccagcgggatgcgttggaaccgatcgaggcgcgaaaggaagtcgaa
gcgtcaaccgatattcggacggatcggcttctcgaatacgctgacggccgacggtcgccg
actgcgagtcgtactggggagttactcgtcacgctcgactcccgtaccgaaacgccggag
accgattcagtccaggaatcgctccggaatgcgattgacgcactcggcgtctcagacaat
cgaatcgcggaagagacggagttactcggcagtgatgtccgtgccctcgttgagaacgac
gatcacgacctcgcgtcactaccgcggttcgagactgttgccgatcgagttctcgatgtg
gccgacgagatgtgctcgatggcggtcgtcgaacagttggtcacactcgaccgactctcg
cgtgaaacgctttatttcgaccgcgtgacggatatcgagcgaatacaggacgagcagcgt
gtttacgacctgacggtacccggaacgcggaactacgttgcaggggacgttccaacggtc
atgcacaacacgacggccgcgcaggccatcgcccgcgaggtctacgacgacgactggcgc
gagaacttcctcgagttgaacgcctccgaccagcgcgggatcgacgtcgtccgcgaccgg
atcaaggacttcgcgcgctcttcgttcggcggctacgaccaccgcatcatcttcctggac
gaggccgacgcgctgacctccgacgcccagtccgcgctgcgccggacgatggagcagttc
tccaacaacacccgcttcatcctctcgtgtaactactcgagccagatcatcgaccccatc
caatctcgctgtgcggtcttccgctttaccgaactctccggaaaagcaatcgaagcgcag
gtccgggagatcgccgccaccgaggacatcgaagtgaccgacgacggcgtcgacgcgctg
gtctacgcggccgacggcgacatgcggaaggcgatcaacgccctgcaggccgccgccgtg
atgggcgagaccgtcgacgaggaaactgtcttcgcgatcaccgcgaccgcccgtcccgag
gaggtcgaggcgatggtcgaccacgccatcgacggcgacttcaccgccgcccgcgccgcc
ttggaggacctgctgaccgagcgcggtctcgccggcggcgacgtcatcgaccaactccac
cgctccgcgtgggagttcgacatccccgagcaggcgacggtccgcctgctcgagcgactc
ggcgaggttgacttccggatcaccgagggcgcgaacgagcgcctgcaactcgaggcgatg
ctggcgtcgctggcgctcgacgacgacaattaa

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