Natrinema versiforme: FEJ81_01125
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Entry
FEJ81_01125 CDS
T05974
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nvr
Natrinema versiforme
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvr03016
]
FEJ81_01125 (endA)
Enzymes [BR:
nvr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FEJ81_01125 (endA)
Transfer RNA biogenesis [BR:
nvr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FEJ81_01125 (endA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QCS41016
UniProt:
A0A4V1FXL5
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All DBs
Position
complement(236489..237559)
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AA seq
356 aa
AA seq
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MALEGRFDDGVVRVGSDARQRYHDSRGYGYPLEGNEIALAPVEAAHLLYRGDLEAVVDAE
SGERLGFREFVAREPGEDFGVRFLVYADLRSRGFYLSPAAEPWVQEPPSGEADFAVFPRG
KGPGDGEIAYALRIIGERTDIPASELREGVLAVVDEESEITYFEVGRRDPTGTSTPDASL
PEGCAADLLADRVVVWEPPLELYERTFYGQPLEGREYDEPTLQCSLLEAAYLAERGAIDL
EPETVRERGREVEGERFDRRLTVYTALRERDVVPKTGYKFGADFRTYADVESVEDLGHSE
LLVRVHPADYVFEPRDLALDVRLAHGVRKTMVFALVDDDAMGVEGIDWWSLERLTP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgaggggcggttcgacgacggcgtcgttcgcgtgggcagcgacgctcgccag
cggtatcacgactcgcgaggctacggctatccgctcgagggcaacgagatcgccctcgca
cccgtcgaggcggcacacctgctctaccggggcgacctcgaggcggtcgtcgacgccgag
agcggcgagcggctggggttccgggagttcgtcgcgcgcgaaccgggcgaggatttcggc
gttcggttcctcgtctacgcggatctgcggtcccgcgggttctacctctcgccggccgcg
gagccgtgggtgcaggagccgccgagcggcgaggccgacttcgcggtcttcccgcgtgga
aaggggcccggtgacggcgagattgcctacgccctgcgcatcatcggcgagcgaacggat
attccggccagcgaactccgggagggggtactggcggtcgtcgacgaggagagcgaaatc
acctacttcgaggtcggccgacgggatccgaccgggacgtcgacccccgacgcgtcactg
cccgagggctgtgcggccgacctgctcgccgaccgggtcgtcgtctgggagcccccgctc
gagctctacgagcggaccttctacggccagcccctcgaggggcgagagtacgacgagccg
acgctgcagtgttccctgctcgaggcggcctacctcgccgaacggggggcgatcgacctc
gagcccgagacggtccgcgagcggggccgcgaggtcgaaggcgagcggttcgatcgccgg
ctgaccgtctacacggccctgcgggagcgcgacgtggtgcccaagacggggtacaagttc
ggggcggacttccggacctacgccgacgtagagtccgtcgaagatctggggcactccgaa
ctgctcgtccgggtccatcccgcagactacgtcttcgaaccgcgcgatctggcgctcgac
gttcggctcgcccacggcgtccggaagacgatggtgttcgcgctcgtcgacgacgacgcc
atgggggtcgaagggatcgactggtggtcgctcgagcggctgacaccctga
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