Natrinema versiforme: FEJ81_06930
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Entry
FEJ81_06930 CDS
T05974
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
nvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_06930
09124 Replication and repair
03420 Nucleotide excision repair
FEJ81_06930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_06930
03400 DNA repair and recombination proteins [BR:
nvr03400
]
FEJ81_06930
Enzymes [BR:
nvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FEJ81_06930
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FEJ81_06930
DNA repair and recombination proteins [BR:
nvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FEJ81_06930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_30
AAA_25
AAA_22
TrmB
MarR_2
AAA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCS42102
UniProt:
A0A4P8WGJ6
LinkDB
All DBs
Position
complement(1422447..1424372)
Genome browser
AA seq
641 aa
AA seq
DB search
MTDERSSTPTDEQRSEPADPTDAAATDTGEENETGDSSDDGDEFTIADFHDASQREGRPV
LTAAAVSRALEIPHDDANDRLETLAERGELQRHAVSTDPVVWYPTELEDLTDRERVVIFP
KRREIIVDRPDQFTRAQLSQFAHLADGNGEQGYRYVVRPEDIWGTPHDSFDDLARTMRQA
LGQRSERLEDWVESQWDRAHQFRLVTHDDGYTVLEGQSAEIMGNVARQKLDEEHVHAPIS
ETEDWVQEGSEAAIKRILYEAGYPVQDHRELESGEELPIDLEVSLRDYQRTWVDRFAEAG
EGVFVGPPGSGKTVAAMGAMAHVEGETLVLVPSRDLAQQWADTIIEYTSLEPHQIGQYHG
GRKEVRPVTIATYQIAGMDRHRSLFDDREWGLVVFDECQHVPSDVYRRSTHLQSKHRLGL
SASPIREDDRQTEIFTLVGPPIGTDWEALFDAGHVAEPELEIRYVPWGDDEQANAYGSAD
GREKYRIAARNRGKIDEVRYLLSAHPDSKAIVFVDYLEQGRELSEALEVPFLSGETPHHE
RRRLLDEFRRNERDLLLISRVGDEGIDLPTADLAIVASGLGGSRRQGTQRAGRTMRPAGG
ALVYVLATRGTREEDFARKQLQHLGRKGMTVREQTVERDED
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaacgttcttcgacgcccaccgacgaacagcgaagcgagcccgcggacccg
accgacgcggcggcgaccgacaccggcgaggagaacgagaccggcgactcgagcgacgac
ggcgacgagttcacgatcgccgacttccacgacgccagccagcgggagggccgcccagtt
ctcaccgccgcggccgtctcccgcgccctcgagatcccccacgacgacgccaacgatcgg
ctcgagaccctcgccgagcggggcgagctacagcgccacgcggtctcgaccgatccggtg
gtctggtatccgaccgaactcgaggacctgaccgatcgcgagcgggtggtcatcttcccg
aagcgtcgggagatcatcgtcgatcgacccgaccagttcacgcgcgcgcaactctcgcag
ttcgcccacctcgcggacgggaacggcgagcagggctatcgctacgtcgtccggccggag
gacatctgggggacgccacacgactccttcgacgacctcgcgcggacgatgcggcaggcg
ctgggccagcgctcggagcgactcgaggactgggtcgagagccagtgggaccgggcccac
cagttccggcttgtgacccacgacgacggctacaccgtcctcgagggccagagcgcggag
atcatgggcaacgtcgcccgccagaaactcgacgaggaacacgtccacgcgccgatctcc
gagaccgaagactgggtccaggagggctcggaagccgcgatcaagcggatcctctacgag
gccggctatccggttcaggaccaccgcgaactcgagtccggcgaggaactgccgatcgat
ctcgaggtgtcgctgcgggactaccagcggacgtgggtcgaccgcttcgccgaggccggc
gagggcgtcttcgtcggcccgccgggcagcgggaagaccgtcgccgcgatgggcgcgatg
gcccacgtcgagggcgagacgctcgtactcgtaccgagccgcgacctcgcccagcagtgg
gctgatacgatcatcgagtacacctcgctcgagccccaccagatcgggcagtaccacggc
ggccgcaaggaggtccgcccggtgacgatcgcaacctaccagatcgcggggatggatcgc
caccgctcgctgttcgacgaccgcgagtgggggctggtggtcttcgacgagtgccagcac
gtcccctcggacgtctaccggcgcagtacgcacctgcagtccaaacaccggctcggactg
tcggccagccccattcgggaggacgaccgccagaccgagatcttcaccctcgtcggaccg
ccgatcggcaccgactgggaggcgctgttcgacgcgggccacgtggccgaacccgaactc
gagatccgctacgtgccgtggggcgacgacgagcaggcaaacgcctacggctcggccgac
ggacgggagaagtaccggatcgccgcgcgcaaccggggcaagatcgacgaggtccgctac
ctgctgtcggcccaccccgactcgaaagccatcgtcttcgtcgactacctcgaacagggc
cgggaactctccgaggcgctcgaggtcccgttcctcagcggcgagacgccccaccatgag
cgccggcggctgttggacgagttccggcggaacgagcgcgatctgttgctcatctcgcgg
gtcggcgacgaggggatcgacctgccgacggccgatctggcgatcgtcgcctccgggctc
ggcgggagccgccggcagggcacccagcgggccgggcggacgatgcgacccgccggcggc
gcgctcgtctacgtgctcgcgacgcggggcacgcgcgaggaggatttcgcccggaaacag
ctccagcacctcggtcgcaaggggatgacagtccgcgagcagacggtcgagcgcgacgag
gactga
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