Natrinema versiforme: FEJ81_07960
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Entry
FEJ81_07960 CDS
T05974
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
nvr
Natrinema versiforme
Pathway
nvr00020
Citrate cycle (TCA cycle)
nvr00640
Propanoate metabolism
nvr00660
C5-Branched dibasic acid metabolism
nvr00720
Other carbon fixation pathways
nvr01100
Metabolic pathways
nvr01110
Biosynthesis of secondary metabolites
nvr01120
Microbial metabolism in diverse environments
nvr01200
Carbon metabolism
Module
nvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FEJ81_07960 (sucD)
00640 Propanoate metabolism
FEJ81_07960 (sucD)
00660 C5-Branched dibasic acid metabolism
FEJ81_07960 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
FEJ81_07960 (sucD)
Enzymes [BR:
nvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FEJ81_07960 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
QCS42295
UniProt:
A0A4P8WGS6
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All DBs
Position
1639031..1639903
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AA seq
290 aa
AA seq
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MSVLVDDDTRVVVQGITGGEGKFHAEQMMEYGTNVVAGAVPGKGGQEVSGVPVYDTVHEA
VDEENADTSVIFVPPAFAGDAVFESLDSDLDLAVAITEGIPTQDMARVNKRLSETDTRLI
GPNCPGLITPGEAKLGILPGNIFSEGNVGLVSRSGTLTYQVVDSLTSRGIGQTTAIGIGG
DPIIGTDFVDALELFEDDPDTDAIVMCGEIGGEDEEEAAAFIDDYVDTPVAGFIAGRTAP
PGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPEEVANHIEEFLS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtactagtcgacgacgacacgcgcgtcgtggtacagggcatcaccggcggggaa
ggcaagttccacgccgaacagatgatggagtacggcaccaacgtcgtcgccggtgcagtc
cccggcaagggcgggcaggaagtcagcggcgtgccggtctacgacacggtccacgaagcc
gtcgacgaggagaacgccgacacctcggtcatcttcgtcccgccggcctttgccggcgac
gcggtcttcgaatcactcgactccgatctcgacctcgcggtcgcgatcacggagggcatc
ccgacccaggacatggcgagagtcaacaagcgtctctccgagacggatacccgacttatt
ggcccgaactgtcccggcctcatcacgcccggtgaggccaaactcggcatcctccccggc
aacatcttctcggaggggaacgtcggtctggtctcccgctccgggacgctgacctaccag
gtcgtcgatagcctgacctctcgcggcatcggtcagacgacggccatcggtatcggcggc
gacccgatcatcggcaccgacttcgtcgacgccctcgagctgttcgaggacgaccccgac
accgacgccatcgtcatgtgcggcgagatcggcggcgaagacgaggaggaagcggccgcg
ttcatcgacgactacgtcgacacgccggtcgccggcttcatcgccggccgtaccgcgccc
ccgggcaagcggatgggccacgccggtgcgatcgtctccggctccggtaccggcaccgca
gagagcaagatctcggcgctcaacgacgccggcgtccccgtcggcgacacccccgaagaa
gtcgccaaccacatcgaagagttcctctcgtag
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