Natrinema versiforme: FEJ81_08550
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Entry
FEJ81_08550 CDS
T05974
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nvr
Natrinema versiforme
Pathway
nvr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FEJ81_08550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvr03019
]
FEJ81_08550
03009 Ribosome biogenesis [BR:
nvr03009
]
FEJ81_08550
04131 Membrane trafficking [BR:
nvr04131
]
FEJ81_08550
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvr04147
]
FEJ81_08550
Messenger RNA biogenesis [BR:
nvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FEJ81_08550
Ribosome biogenesis [BR:
nvr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FEJ81_08550
Membrane trafficking [BR:
nvr04131
]
SNARE
SNARE associated proteins
Others
FEJ81_08550
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FEJ81_08550
Exosome [BR:
nvr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FEJ81_08550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_14
AAA_22
AAA_33
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_7
AAA_25
Mg_chelatase
IstB_IS21
ABC_tran
AAA_3
DUF815
TsaE
NB-ARC
Sigma54_activat
AAA_24
AAA_18
AAA_11
AAA_17
ATPase
AAA_30
Parvo_NS1
Zeta_toxin
PhoH
SLFN-g3_helicase
Bac_DnaA
bpMoxR
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-ProteinID:
QCS42407
UniProt:
A0A4P8WGB4
LinkDB
All DBs
Position
1764682..1766943
Genome browser
AA seq
753 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMNELDLENGDYIVIKGKGDSQAVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDNVTIEPADVKPATSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPSGTVVITDSTSIEISETPAEQVQSGGGA
SAEGVPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR
EEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPD
KEGRKEILQVHTRGMPLDEGIDLDQYAENTHGFVGADLESLARESAMNALRRIRPELDLE
SEEIDADVLDSLEVSERDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKEQLRETI
QWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGKRGQRQGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARKAIFDVHTRNKPLAESVDLEW
LASRTDGYVGADIEAVCREASMAASREFINSVDPEDMGDTIGNVRISREHFETALEEVNP
SVTPETREQYEDLEEEFQQAEPGQDEQLGRTFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaaaccactgaaacagaaagacgccggccgcggactcgccgcgatc
gaccgcgtctcgatgaacgaactcgacctcgagaacggcgattacatcgtcatcaagggg
aaaggagacagtcaggccgtcgctcgcgtctggcccggctaccccgaagacgaaggacgc
ggcatcgtccgcatcgacggtcgcctgcgccaggaggccgatgtcgggatcgacgacaac
gtcacgatcgagcccgcagacgtcaagcccgccacgtcggtcaccgtcgcgctgccccag
aatctccgcattcgcggggatatcggcccgctcgtccgcgacaagctgtccggacaggcc
gtcaccgagggccagaccgtaccgttctcgctctcgttcggtcccatggccagctccggc
cagtcggtgccgctgaagatcgcgagcacctcgccgtcgggcaccgtcgtcatcacggac
tcgacgagcatcgagatctccgagacgcccgccgaacaggtccagtccggcggcggtgcg
tccgccgaaggcgtcccgaacgtcgcctacgaggacatcggcggtctggacgacgaactc
gatcaggtccgcgagatgatcgagctgccgatgcgccaccccgagctgttccagcagctg
ggcatcgagccgccgaagggcgtgctcctgcacggcccgccgggcaccgggaagacgctg
atggcgaaagccgtcgccaacgagatcgacgctcacttcgagacgatctccgggccggag
atcatgtcgaagtactacggcgagtccgaagagcaactccgcgaggtcttcgaggaggcc
gaggagaacgccccctcgatcatcttcatcgacgaactcgactccatcgcggcaaagcgc
gaggaggccggcggtgacgtcgaacgacgcgtcgtcgcccaactgctctcgctgatggac
ggcctcgaggaacggggccgcgtcacggtcatcgccgcgaccaaccgcgtcgacgccatc
gaccccgcgctccggcgcggcggtcgcttcgaccgcgagatcgagatcggcgtccccgac
aaggagggccgcaaggagatcctgcaggtccacacccgcgggatgcccctcgacgagggg
atcgacctcgatcagtacgccgagaacacccacggcttcgtcggtgccgacctcgagtcg
ctcgcacgcgaaagcgcgatgaacgcgctccggcgcatccgccccgaactcgacctcgag
tccgaggagatcgacgccgacgtgctcgactcactcgaagtctccgaacgcgacttcaag
gaggcgctcaagggcatccagccctcggcgatgcgcgaggtcttcgtcgaagtccccgac
gtcacgtggaacgacgtcggcggcttaggcgacaccaaagagcaactgcgcgagacgatc
cagtggccgctcgactaccccgaggtgttcgagcagatggacatgcaggccgccaagggc
gtcctcatgtacggcccgccgggcaccgggaagaccctgctcgccaaggccgtcgccaac
gaggcccagtcgaacttcatctcgatcaagggccccgaactgctgaacaagtacgtcggg
gagtccgagaagggcgtccgcgaagtcttcgagaaggcgcggtcgaacgcaccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggcaaacgcggccagcggcagggcgactcc
ggcgtcggcgaacgcgtcgtctcccagctcctgacggaactggacggcctcgaggaactc
gaggacgtcgtcgtgatcgccacgaccaaccggccggacctgatcgacagcgccctgctc
cgtcccggacggctcgaccgccacgtccacgtgccggtccccgacgaggacgcgcgcaag
gcgatcttcgacgtccacacccgcaacaagcccctggccgaatccgtcgacctcgagtgg
ctggccagtcggacggacggctacgtcggtgccgacatcgaagcggtctgccgcgaggcg
tcgatggccgccagccgcgagttcatcaactcggtcgaccccgaggacatgggcgacacc
atcggcaacgttcgcatcagccgcgaacacttcgagacggcgctcgaggaggtcaacccg
agcgtcacccccgagacccgcgagcagtacgaggacctcgaagaggagttccagcaggcc
gagcccggacaggacgaacagctcggacggaccttccagtaa
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