Natrinema versiforme: FEJ81_13725
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Entry
FEJ81_13725 CDS
T05974
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nvr
Natrinema versiforme
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvr03016
]
FEJ81_13725 (truD)
Enzymes [BR:
nvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FEJ81_13725 (truD)
Transfer RNA biogenesis [BR:
nvr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FEJ81_13725 (truD)
Prokaryotic type
FEJ81_13725 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QCS43361
UniProt:
A0A4P8WMX4
LinkDB
All DBs
Position
2800609..2801988
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AA seq
459 aa
AA seq
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MRSAHPTEQAVGMDHYVSETDGVGGRLREDDADFRVRELERFDTEPVDAPTDAYPHLVFR
ATLRGWDTNDFASRLSDALGLSRERVNWAGTKDKYAVTTQLFSVYGADPADLPEIDGVDL
EVLGRAGRNLEFGDLAGNAFELVVTDPERPENAAAITDELRAFGGLESGGGGASNGDSDD
ERAVSIGVPNFFGQQRFGSRRPVTHKVGLAIARDDWEGAVMAYLGNPTDAEPEGTQEARA
FVEETRDWQEALERVPHRLRYERSMIHALAEYDGEPGPEQFRAALERVPSNLQRLFVHAA
QSYAFNLMLSERLERGLPFDRPVAGDVVCFSDTDAPDGLALPDTDRLQRVDERRVDSVTR
HCERGRAFVTAPLVGTETELADGEQGEIERSVLDDLGLEPADFDLPGEFNSTGTRRAVLL
RTDLALETEPLTLEFALPKGSYATVVLREYLKVDPVDLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagcccaccctacggagcaggccgtcggcatggaccactacgtcagcgagacc
gacggcgtcggcggtcgcctgcgcgaggacgacgcggacttccgggtgcgcgaactcgag
cgcttcgacaccgaacccgtcgacgcgccgacggacgcctacccccacctcgtcttccgg
gcgacgctgcgagggtgggacaccaacgatttcgcctcgcggctctcggacgcgctcggc
ctctcgagagagcgggtcaactgggccggcacgaaggacaagtatgccgtgaccacccag
ctgttttcggtctacggagccgatcccgcggacctgccggaaatcgacggcgtcgatctc
gaggttctgggccgcgcggggcggaacctcgagttcggcgacctcgcgggcaacgcgttc
gaactcgtcgtcaccgaccccgaacggccggaaaacgccgcggcgatcaccgacgaactg
cgcgcgttcggcgggctcgagagcggcggtggcggggcgtcgaacggcgattccgacgac
gagagagcggtctcgatcggcgtccccaacttcttcggccagcagcgcttcgggagccgc
cggccggtgacccataaagtaggcctcgcgatcgcccgcgacgactgggagggcgcggtg
atggcctacctcgggaatccgacggacgcggaacccgagggaacgcaggaagccagagcc
ttcgtcgaggagacgagagactggcaggaagccctcgagcgggtgccacaccgactgcgc
tacgagcgctcgatgatccacgccctcgccgagtacgacggcgagccgggtcccgagcag
ttcagagcggccctcgagcgggtgccctcgaacctccagcggctgttcgtccacgcagcc
cagtcctacgcgttcaacctgatgctttccgagcgcctcgagcgcgggctccccttcgac
cgccccgtcgcgggcgacgtggtctgtttctcggacaccgacgctcccgacgggctcgca
ctgcccgacaccgatcggctccagcgggtcgacgagcgccgggtcgactcggtgacccgc
cactgcgagcgcggccgggcgttcgtcaccgcgccgctggtcggcaccgagaccgaactc
gccgacggcgagcagggcgaaatcgagcgcagcgttctcgacgacctcggcctcgagccc
gcggacttcgatcttcccggcgagttcaattcgaccggtacccggcgagccgtgctcctc
cggacggatctggccctcgagacggagccgctgaccctcgagttcgcgctgccgaagggg
tcgtacgcgacggtcgtcctgcgggagtacctgaaggtcgatccggtcgacctcggctga
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