Natrinema versiforme: FEJ81_15830
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Entry
FEJ81_15830 CDS
T05974
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_15830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_15830
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FEJ81_15830
Prokaryotic type
Archaeal type
TFB
FEJ81_15830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
DZR_2
DUF7560
Zn_ribbon_LysW
HTH_Tnp_ISL3
Anti-TRAP
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QCS43749
UniProt:
A0A4P8WJT1
LinkDB
All DBs
Position
complement(3197515..3198498)
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AA seq
327 aa
AA seq
DB search
MTNAPSNTRVRRSEPETNEQETESEEQQDLVCPECAGNLVVDDEHGETVCEDCGLVVEED
SVDRGPEWRAFDAAEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQ
RLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPTNVRETASVIYRRALDEDLLPGRS
IEGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPESYV
PRFASGLELSDEAEHRARSLLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVS
DVADISEVTIRNRYHELLEAEETIGMA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgcaccatcgaacacgagagtacgacgtagcgaacccgaaaccaacgaacag
gagaccgagagcgaggagcagcaggatctggtctgtcccgagtgtgccggcaacctcgtc
gtcgacgacgagcacggcgagaccgtctgcgaggactgcggactggtcgtcgaggaagac
tccgtcgaccgcggccccgagtggcgggccttcgacgccgccgagaagaacgagaagtcc
cgcgtgggcgcacccacgacgaacacgatgcacgacaaggggctctcgacgaacatcgac
tggcgaaataaggacgcctacggcaactcgctcggctcccgccagcgcgagaagatgcag
cgcctgcgcaagtggaacgagcgcttccgcacccgcgactccaaggagcgcaacctgaaa
caggcactcggcgagatcgaccggatggcgagcgcgctgggcctcccgacgaacgtccgc
gagaccgcgtcggtcatctaccgccgcgcgctcgacgaggacctgctgccgggccgctcc
atcgagggcgtctcgacggcctgtgtctacgccgccgcccgacaggccggcgtcccccgg
agcctcgacgagatcgccgacgtctcccgcgtcgagaaaaacgagatcgcgcgcacctac
cgctacgtggtccgcgaactgggcctcgaggtccagccggccgaccccgagagctacgtc
cctcgctttgcctcgggactcgaactctcagacgaggccgaacaccgcgcgcggagcctg
ctccagaacgccaaggagaagggcgtccacagcggcaagtcgccggtcggcctcgcggcc
gccgcggtctacgccgccgcgctcctgaccaacgagaagaccacgcaggccgccgtcagc
gacgtcgccgacatctccgaagtgacgattcggaaccgctatcacgaactcctcgaggcc
gaggagaccatcgggatggcctaa
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