Natrinema versiforme: FEJ81_16875
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Entry
FEJ81_16875 CDS
T05974
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_16875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_16875
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FEJ81_16875
Prokaryotic type
Archaeal type
TFB
FEJ81_16875
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
Zn_ribbon_RRN7
Auto_anti-p27
Trm112p
Motif
Other DBs
NCBI-ProteinID:
QCS43932
UniProt:
A0A4P8WLD7
LinkDB
All DBs
Position
complement(3390094..3391059)
Genome browser
AA seq
321 aa
AA seq
DB search
MASPTRQRERDPETTEQTQETERERVCDECDGGTLVKSEDQGELVCDQCGLIVEGTNIDH
GPEWRAFNHSERQNKSRVGAPTTQTMHDKGLTTSIDWKNQDAYGRSISSDKRNQMRRLRK
WQERIRTKDAGERNLQFALSETDRMASSLAIPRSVREVACVIYRRALDEDLIRGRSIEGV
ATSTLYAACRMEGIPRSLEEVAAVSRVERKEIGRTYRYVAQELNLEMEPVNPKKYVPRFC
SELELSEEVQVKANEIIDVTTEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVSDVAQ
VTEVTIRNRYQEQIEAMGIHE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccccacccgtcagcgcgaacgcgatcctgaaacgacagaacaaacacaggag
acagagcgcgagcgggtatgtgacgagtgtgacggcggcacactcgtcaagagcgaggat
cagggcgaactcgtctgcgaccagtgcggtctcatcgtcgaagggacgaacatcgaccac
gggccggaatggcgcgcgttcaaccactccgagcgccagaacaagtcccgcgtcggcgcg
ccgacgacccagacgatgcacgacaaggggctgacgacctccatcgactggaagaatcag
gacgcctacggccgatcgatctcctcggacaagcgcaatcagatgcgccgcctgcggaag
tggcaggaacgaatccgcaccaaagacgccggcgaacgaaacctccagtttgcgctgtcg
gaaaccgaccggatggcctcctcgctggcgatcccccgctcggtccgggaagtcgcctgc
gtgatctaccggcgcgcactcgacgaggacctcatccgcgggcgctcgatcgagggcgtc
gcgaccagtacgctctacgcggcctgccgtatggaaggcatcccgcgatcgctcgaggaa
gtcgccgccgtctcccgcgtcgagcgcaaggagatcggccgcacctatcgctacgtcgca
caggaactcaacctcgagatggagccggtcaacccgaagaagtacgtgccgcgattctgc
tcggagctcgaactctccgaagaggtccaagtcaaggcaaacgagatcatcgacgtcacg
accgagaaggggctgctctcgggcaagtcgccgactggctacgccgcggccgcgatctac
gccgcgtcgctgctctgtaacgagaagaagacccagcgcgaagtctcggacgtcgcgcag
gtgaccgaggtcacgatccggaaccggtaccaagagcagatcgaagcgatgggcattcac
gagtaa
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