Natrinema versiforme: FEJ81_17515
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Entry
FEJ81_17515 CDS
T05974
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
nvr
Natrinema versiforme
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvr03019
]
FEJ81_17515
Messenger RNA biogenesis [BR:
nvr03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
FEJ81_17515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DEXQc_Suv3
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QCS44053
UniProt:
A0A4P8WNP0
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All DBs
Position
3533618..3535684
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AA seq
688 aa
AA seq
DB search
MSKQVQQVETIFCHETGDDYLVVVERDGKRLFRAKLGLSETSAGPRPAKFRLKQGSSEEP
RQPDEFVELARRAKRIRISEQTSAAGRRDLREMLEGYQLEDKAKTVRTCRYCASAGRYSP
ITTETAVKDDNDWICRDCARQELERQLSFSGGGAVSGAAKERLEDLMMEVQDLERIVNLL
KGQLDPDLTKFDTISATTDEVDPVRTDSLNLHPGLQNLLEDRFDTLLPVQSLSVEHGLFD
GDDQLVVSATATGKTLVGELAGINRVLNNKGTMLFLVPLVALANQKYEDFQDEYGHLVDV
SIRVGASRVADEGERFDPNADVIVGTYEGIDHALRTGKDMGDIGTVVIDEVHTLKEEDRG
HRLDGLISRLKYTCEQRATRRDDYGGAQWVYLSATVGNPEQLTEALEATLIEFEERPVPI
ERHVTFADGQEKVRVENKLVRREFDSESSKGYRGQTIIFTNSRRRCHEISRKLDYSAAPY
HAGLDYKRRKEVERKFGEQELSAVVTTAALAAGVDFPASQVIFDSLAMGIEWLSVQEFHQ
MLGRAGRPDYHDKGTVYVLVEPDTAYHNSMEMTEDEVAFKLLKGEMESVMTHYDEAAAVE
ETLANITVGGKAAKALNDRMLGEVPTKHAIGKLLEYDFIDGFEPTPLGQVVTEHFLEPGQ
AFMILDGIRKDAHPYELVADLELRDTDL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagcaggtccagcaggtcgaaacgatattctgtcacgaaacgggcgacgactac
ctcgtcgtcgtcgaacgtgacggcaaacggctgttccgtgcgaaactcggactctccgaa
acctcggccggcccccgccccgccaagttccggctgaagcagggctcgagcgaggagccg
cgccagcccgacgagttcgtcgaactcgcccgccgagcgaagcggatccgcatctccgaa
cagacctccgccgccggacgacgggatctacgggagatgctcgagggctaccaactcgag
gacaaggcaaagaccgtcaggacctgtcgctactgcgcctccgcgggccgatactcgccg
atcacgaccgaaactgccgtcaaggacgacaacgactggatctgtcgggactgcgcccgg
caggaactcgagcgccagctctcgttttccggcggcggtgcggtatcgggcgccgcaaag
gaacgactcgaggatctcatgatggaggtccaggatctcgagcggatcgtcaatctgctc
aagggccagctggatcccgatctgacgaagttcgataccatctcggcgacgacggacgag
gtcgatcccgtccgcaccgactcgctgaacctgcatccggggctccagaacctgctcgag
gaccggttcgataccctgctgccggtccagagcctctccgtcgagcacggccttttcgat
ggtgacgaccagttggtcgtctccgcgacggcgaccgggaagaccctcgtcggcgaactg
gcagggatcaatcgcgtgttgaacaacaaggggacgatgctctttctcgttcccctcgtg
gcgcttgcaaaccagaagtacgaggactttcaggacgagtacggccacctcgtcgacgtc
tccattcgggtgggcgcgagccgagtcgccgacgagggcgagcggttcgaccccaacgcc
gacgtcatcgtcggcacctacgaggggatcgaccatgccctgcggacgggcaaggacatg
ggcgacatcgggaccgtcgtcatcgacgaggtccacacgctcaaggaggaagaccggggc
caccgactcgacggcctgatctcccggctcaagtacacctgcgaacagcgggcgacgcgc
cgggacgactacggcggcgcacagtgggtctacctctcagcgaccgtcggcaatcccgaa
cagctcacggaggctctcgaggcgacgctcatcgagttcgaggagcgaccggtgccgatc
gagcgccacgtcaccttcgcggacggccaggagaaggtccgcgtcgagaacaaactcgtc
agacgcgagttcgacagcgagtcctcgaaggggtatcgcggccagacgattatcttcacc
aactcccggcggcgctgtcacgagatttcgcggaaactcgactactcggccgcgccctac
cacgccggcctcgactacaagcgccggaaggaggtcgaacggaagttcggcgagcaggaa
ctgtccgcggtcgtcacgaccgccgcgctcgcggcgggggtcgacttccccgcctcgcag
gtgatcttcgactcgctagcgatgggcatcgagtggctctcggtccaggaattccaccag
atgctcggccgcgcgggccggcccgactaccacgacaagggcacggtgtacgtcctcgtc
gaacccgacacggcctaccacaactcgatggagatgaccgaagacgaggtcgccttcaag
ttactcaaaggagaaatggagtcggtcatgacccactacgacgaggccgccgccgtcgag
gaaacgcttgcgaacatcacggtcggcggcaaggccgcgaaggcgctcaacgaccgcatg
ctcggcgaagtccccacgaaacacgccatcgggaagctcctcgagtacgacttcatcgac
ggcttcgagcccacgccgctgggtcaggtcgtcaccgaacacttcctggagcccggacag
gccttcatgatcctcgacggtatccggaaggacgcccacccctacgaactcgtcgcggac
ctcgagcttcgcgataccgatctgtaa
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