Natrinema versiforme: FEJ81_17565
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Entry
FEJ81_17565 CDS
T05974
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
nvr
Natrinema versiforme
Pathway
nvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FEJ81_17565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvr03021
]
FEJ81_17565
Transcription machinery [BR:
nvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FEJ81_17565
Prokaryotic type
Archaeal type
TFB
FEJ81_17565
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
RB_B
DUF8122
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QCS44061
UniProt:
A0A4P8WPL4
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Position
complement(3550978..3551877)
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AA seq
299 aa
AA seq
DB search
MADIDSSAICPECDGRLRRRGTETICEECGLISAEDAIDHGPEWRSFEDDDTDRRRTGAP
LTRSRHDRGLSTEIGYGSGSDSSYSSRLTGRKRRQIARLRREHNRARISSKAERNQVYGF
AEIRRITALLSLPDSAREQACALFESAQSEGLFQGRSLEGFAAAAIYAICRTRSVARTSE
EIADVARADADELTVAYDALNRDLGLPTGPIDPTQYLPRYASKLEVGTDVERRASEHVAD
LLEAGKVVGRNPSGVAAACLYKAAGEREEWPTVTQARAADVADVAAVTIRSTVTTIEDR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatcgattcgtctgcgatctgccccgagtgtgacggcagattacggaggagg
ggtaccgaaaccatctgcgaagaatgtggacttatctccgccgaggatgcgatcgatcac
ggtcccgaatggcggtcgttcgaagatgatgacaccgaccggcgacgaaccggtgcaccg
ctcactcgctcgagacacgatcggggactctcgacggaaatcggctacggctccggttcc
gactcgagctacagttcgcggctcaccggtcgaaaacgccgccagatcgccaggttgcgt
cgggagcacaatcgcgctcgaatctcgtcgaaagccgaacggaatcaggtctacgggttc
gccgaaatcaggcggatcaccgcgttgctctcgctaccggactccgccagagaacaggcc
tgtgctctcttcgaatccgcccagtccgaggggctctttcagggccgctcgctcgaaggg
ttcgccgccgccgcgatctacgcgatctgtcgaacccgatcggtcgcccgcacgagcgag
gagatcgccgacgtcgctcgcgcagatgcggatgaactcaccgttgcctacgacgccttg
aaccgcgatctcggactcccgacggggccgatcgatcccacccagtacctgccgcgatac
gcctcgaaactcgaggtcggcaccgacgtcgaacgccgcgcgagcgaacacgtcgccgat
ctgctcgaggcgggaaaagtcgtcggccgcaatccaagcggcgtcgccgcggcctgtctc
tacaaggccgccggcgagcgcgaggagtggccgacggtaactcaagcgagagccgccgat
gtcgccgacgtggcagcggtgacgatccggtcgaccgttacgaccatcgaggaccgctga
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