Natrinema versiforme: FEJ81_17985
Help
Entry
FEJ81_17985 CDS
T05974
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nvr
Natrinema versiforme
Brite
KEGG Orthology (KO) [BR:
nvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvr03016
]
FEJ81_17985 (thpR)
Enzymes [BR:
nvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FEJ81_17985 (thpR)
Transfer RNA biogenesis [BR:
nvr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FEJ81_17985 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QCS44135
UniProt:
A0A4P8WLC6
LinkDB
All DBs
Position
3632827..3633384
Genome browser
AA seq
185 aa
AA seq
DB search
MRLFVSVDLPDDLAEPVTDLQDEFADAGGLDFTDPEQAHITMKFLGDVDEDRLPDLEREL
AAAVEDADIDPFPVRYGGLGVFPNLDYISVVWLGVERGGEELTRLHEAIEGRTTAMGFDA
EDHDFTPHVTLARMEHAGGKELVQELVREREPTVGETRVDEIRLTESTLTDEGPVYSTVA
SFPLE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtcagcgtcgacctgcccgacgacctcgcggaaccggtcaccgacctg
caagacgagttcgccgacgccggcggactcgatttcaccgaccccgagcaggcccacatc
acgatgaagttcctcggcgacgtggacgaggatcggctgcccgacctcgagcgggaactc
gccgccgccgtcgaggacgcggatatcgacccgtttcccgtccgctacggcgggctgggc
gtctttccgaacctcgactacatcagcgtcgtctggctgggcgtcgagcgcggcggcgag
gaactcacgcgactccatgaggccatcgagggtcggacgactgcgatgggattcgacgcc
gaggaccacgatttcacccctcacgtcacgctcgcgcggatggaacacgccggcgggaag
gaactggtccaagaactcgtccgggagcgcgaaccgacggtcggcgagacgcgagtcgac
gagatccgactgaccgagagcacgctcaccgacgagggcccggtctactcgacggtcgca
tcgttcccgctcgagtga
DBGET
integrated database retrieval system
